RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CDR2Q01850 454 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 HLA-BQ31612 363 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 TRNP1Q6NT89 227 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 NCEH1Q6PIU2 408 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 ARCQ7LC44 396 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 BNIPLQ7Z465 357 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 AADATQ8N5Z0 425 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 C1orf74Q96LT6 269 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 CAMK1GQ96NX5 476 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 NLRC4Q9NPP4 1024 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 VPS28Q9UK41 221 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 DAAM1Q9Y4D1 1078 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 SNX10Q9Y5X0 201 aa19.48■□□□□ 0.71
VARS-220ENST00000461874 FAM47DPA6NHR8 397 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 DRGXA6NNA5 263 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 C10orf142B7Z368 130 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 ATP9BO43861 1147 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 CYP1A1P04798 512 aaPredicted RBP19.47■□□□□ 0.71
VARS-220ENST00000461874 CHRNB2P17787 502 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 GRIA4P48058 902 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 COPB1P53618 953 aaKnown RBP19.47■□□□□ 0.71
VARS-220ENST00000461874 FMO1Q01740 532 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 TEAD4Q15561 434 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 STX1AQ16623 288 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 KIF19Q2TAC6 998 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 ALFQ53S48 1182 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 ACBD5Q5T8D3 534 aaPredicted RBP19.47■□□□□ 0.71
VARS-220ENST00000461874 LRSAM1Q6UWE0 723 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 NAXDQ8IW45 347 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 OR2T34Q8NGX1 318 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 SPAG5Q96R06 1193 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 TMPRSS4Q9NRS4 437 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 LIMA1Q9UHB6 759 aaKnown RBP19.47■□□□□ 0.71
VARS-220ENST00000461874 SLC25A13Q9UJS0 675 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 FNDC3AQ9Y2H6 1198 aaKnown RBP19.47■□□□□ 0.71
VARS-220ENST00000461874 CABIN1Q9Y6J0 2220 aa19.47■□□□□ 0.71
VARS-220ENST00000461874 LRRC72A6NJI9 287 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 IL1BP01584 269 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 ZNF18P17022 549 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 SPINK2P20155 84 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 MMP8P22894 467 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 MYL5Q02045 173 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 SYCP1Q15431 976 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 TRIP6Q15654 476 aaKnown RBP19.46■□□□□ 0.71
VARS-220ENST00000461874 DLG2Q15700 870 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 ST3GAL2Q16842 350 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 ACCSLQ4AC99 568 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 LRRC31Q6UY01 552 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 ANKRD20A12PQ8NF67 263 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 CFAP57Q96MR6 1250 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 MUC3BQ9H195 1237 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 TM7SF3Q9NS93 570 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 ANKRD6Q9Y2G4 727 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 SNX11Q9Y5W9 270 aa19.46■□□□□ 0.71
VARS-220ENST00000461874 USP24Q9UPU5 2620 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 KMT2BQ9UMN6 2715 aaPredicted RBP19.45■□□□□ 0.7
VARS-220ENST00000461874 IGLV3-10A0A075B6K4 115 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 A0A1W2PPC4 97 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 LRRC10BA6NIK2 292 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 LGALS16A8MUM7 142 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 RHOCP08134 193 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 RDXP35241 583 aaKnown RBP19.45■□□□□ 0.7
VARS-220ENST00000461874 STAT1P42224 750 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 ARTNQ5T4W7 220 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 DBX2Q6ZNG2 339 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 DSG4Q86SJ6 1040 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 SETD3Q86TU7 594 aaPredicted RBP19.45■□□□□ 0.7
VARS-220ENST00000461874 SH2D3CQ8N5H7 860 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 OR8D1Q8WZ84 308 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 HAPLN3Q96S86 360 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 PSMB7Q99436 277 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 SCNM1Q9BWG6 230 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 METTL5Q9NRN9 209 aaKnown RBP19.45■□□□□ 0.7
VARS-220ENST00000461874 PCDHB9Q9Y5E1 797 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 PCDHGB2Q9Y5G2 931 aa19.45■□□□□ 0.7
VARS-220ENST00000461874 FRYQ5TBA9 3013 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 E9PAM4 449 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 HYAL3O43820 417 aaPredicted RBP19.44■□□□□ 0.7
VARS-220ENST00000461874 CBFA2T3O75081 653 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 ENDOD1O94919 500 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 TRIM16O95361 564 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 DRD3P35462 400 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 CCR5P51681 352 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 METAP1P53582 386 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 ADPRHP54922 357 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 RACK1P63244 317 aaKnown RBP19.44■□□□□ 0.7
VARS-220ENST00000461874 KRT83P78385 493 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 NCAPHQ15003 741 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 CCDC183Q5T5S1 534 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 LAYNQ6UX15 382 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 TRIM72Q6ZMU5 477 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 FAM131BQ86XD5 332 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 EMC1Q8N766 993 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 OR14C36Q8NHC7 312 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 SLC30A5Q8TAD4 765 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 FAM131CQ96AQ9 280 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 C2orf49Q9BVC5 232 aaPredicted RBP19.44■□□□□ 0.7
VARS-220ENST00000461874 EBF2Q9HAK2 575 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 MPP6Q9NZW5 540 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 PCOLCE2Q9UKZ9 415 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms