RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 PSAPL1Q6NUJ1 521 aa21.81■■□□□ 1.08
HMGB3-205ENST00000455596 SETD3Q86TU7 594 aaPredicted RBP21.81■■□□□ 1.08
HMGB3-205ENST00000455596 PHF13Q86YI8 300 aaPredicted RBP21.81■■□□□ 1.08
HMGB3-205ENST00000455596 STK40Q8N2I9 435 aa21.81■■□□□ 1.08
HMGB3-205ENST00000455596 HDDC3Q8N4P3 179 aa21.81■■□□□ 1.08
HMGB3-205ENST00000455596 MINDY1Q8N5J2 469 aa21.81■■□□□ 1.08
HMGB3-205ENST00000455596 JOSD2Q8TAC2 188 aa21.81■■□□□ 1.08
HMGB3-205ENST00000455596 FAM129BQ96TA1 746 aa21.81■■□□□ 1.08
HMGB3-205ENST00000455596 AGPAT1Q99943 283 aa21.81■■□□□ 1.08
HMGB3-205ENST00000455596 SELENOOQ9BVL4 669 aa21.81■■□□□ 1.08
HMGB3-205ENST00000455596 CHD5Q8TDI0 1954 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 IGLV3-10A0A075B6K4 115 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 BCAT2O15382 392 aaPredicted RBP21.8■■□□□ 1.08
HMGB3-205ENST00000455596 OPHN1O60890 802 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 KRT3P12035 628 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 CSRP1P21291 193 aaKnown RBP21.8■■□□□ 1.08
HMGB3-205ENST00000455596 SLC8A1P32418 973 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 KRT83P78385 493 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 ELAVL3Q14576 367 aaKnown RBP21.8■■□□□ 1.08
HMGB3-205ENST00000455596 C15orf59Q2T9L4 293 aaPredicted RBP21.8■■□□□ 1.08
HMGB3-205ENST00000455596 ARL13BQ3SXY8 428 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 CCDC14Q49A88 953 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 ACCSLQ4AC99 568 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 N4BP2L1Q5TBK1 243 aaPredicted RBP21.8■■□□□ 1.08
HMGB3-205ENST00000455596 SH3PXD2AQ5TCZ1 1133 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 FRS2Q8WU20 508 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 OMDQ99983 421 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 FUCA2Q9BTY2 467 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 MPP6Q9NZW5 540 aa21.8■■□□□ 1.08
HMGB3-205ENST00000455596 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.8■■□□□ 1.08
HMGB3-205ENST00000455596 LAMA1P25391 3075 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 A0A1W2PP55 124 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 C2CD4BA6NLJ0 364 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 ATP9BO43861 1147 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 SRGAP2O75044 1071 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 GJB6O95452 261 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 ADH1BP00325 375 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 VAV1P15498 845 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 C5AR1P21730 350 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 OR1E1P30953 314 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 PTPN9P43378 593 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 PSMD8P48556 350 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 STRADAQ7RTN6 431 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 ZDHHC5Q9C0B5 715 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 SERGEFQ9UGK8 458 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 FZD4Q9ULV1 537 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 MYO6Q9UM54 1294 aa21.79■■□□□ 1.08
HMGB3-205ENST00000455596 RNASEH2AO75792 299 aaKnown RBP21.78■■□□□ 1.08
HMGB3-205ENST00000455596 FSBPO95073 299 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 CEACAM1P13688 526 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 GRIK2Q13002 908 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 KLHL40Q2TBA0 621 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 C6orf118Q5T5N4 469 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 MON1BQ7L1V2 547 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 TFAP2DQ7Z6R9 452 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 DSG4Q86SJ6 1040 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 SH2D3CQ8N5H7 860 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 C3orf20Q8ND61 904 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 OR2I1PQ8NGU4 316 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 BIRC7Q96CA5 298 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 C2orf49Q9BVC5 232 aaPredicted RBP21.78■■□□□ 1.08
HMGB3-205ENST00000455596 ZYG11BQ9C0D3 744 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 NEUROG2Q9H2A3 272 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 SLC32A1Q9H598 525 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 DNAAF2Q9NVR5 837 aaKnown RBP21.78■■□□□ 1.08
HMGB3-205ENST00000455596 ADAMTS1Q9UHI8 967 aa21.78■■□□□ 1.08
HMGB3-205ENST00000455596 IL1BP01584 269 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 GPD1P21695 349 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 RFC1P35251 1148 aaPredicted RBP21.77■■□□□ 1.08
HMGB3-205ENST00000455596 C1QBPQ07021 282 aaKnown RBP21.77■■□□□ 1.08
HMGB3-205ENST00000455596 SEMA3BQ13214 749 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 IQCB1Q15051 598 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 DLG2Q15700 870 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 RAB6CQ53S08 254 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 KIAA0895LQ68EN5 471 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 IRF2BP2Q7Z5L9 587 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 DCAF4L2Q8NA75 395 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 C1orf216Q8TAB5 229 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 OR8D1Q8WZ84 308 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 BAP1Q92560 729 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 PSMB7Q99436 277 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 RAB6CQ9H0N0 254 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 PPARGC1AQ9UBK2 798 aaKnown RBP21.77■■□□□ 1.08
HMGB3-205ENST00000455596 HS3ST2Q9Y278 367 aa21.77■■□□□ 1.08
HMGB3-205ENST00000455596 CNOT1A5YKK6 2376 aaKnown RBP21.76■■□□□ 1.07
HMGB3-205ENST00000455596 A0A1W2PQC6 194 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 SYCE3A1L190 88 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 FAM47DPA6NHR8 397 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 LRRC72A6NJI9 287 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 SIGLEC16A6NMB1 481 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 UPK3BL1B0FP48 263 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 UPK3BL2E5RIL1 263 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 GIPC1O14908 333 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 GOT1P17174 413 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 TNFAIP3P21580 790 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 ADRA1BP35368 520 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 GALCP54803 685 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 ACAD10Q6JQN1 1059 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 WDR59Q6PJI9 974 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 ZNF783Q6ZMS7 281 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms