RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 ETFBP38117 255 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 GARSP41250 739 aaKnown RBP16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 PAPOLAP51003 745 aaKnown RBP16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 PLK1P53350 603 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 LMAN2Q12907 356 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 SLC12A1Q13621 1099 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 OASLQ15646 514 aaKnown RBP16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 ASTLQ6HA08 431 aaPredicted RBP16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 KIAA0907Q7Z7F0 614 aaPredicted RBP16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 C1orf54Q8WWF1 131 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 CHFRQ96EP1 664 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 HMCESQ96FZ2 354 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 ACE2Q9BYF1 805 aaPredicted RBP16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 BRD8Q9H0E9 1235 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 DNPEPQ9ULA0 475 aa16.99■□□□□ 0.31
CCDC90B-202ENST00000455220 ARHGAP42A6NI28 874 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 HACD1B0YJ81 288 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 PPP1R12AO14974 1030 aaPredicted RBP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 PHF2O75151 1096 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 TULP3O75386 442 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 RBP3P10745 1247 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 MZF1P28698 734 aaPredicted RBP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 CD70P32970 193 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 ACVRL1P37023 503 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 EIF2DP41214 584 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 CSKP41240 450 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 EIF3EP60228 445 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 ZNF33AQ06730 810 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 PPIDQ08752 370 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 SERINC3Q13530 473 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 TDGQ13569 410 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 RNF219Q5W0B1 726 aaPredicted RBP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 CCDC33Q8N5R6 958 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 OR7D4Q8NG98 312 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 CSGALNACT1Q8TDX6 532 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 TSGA13Q96PP4 275 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 QKIQ96PU8 341 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 FEM1AQ9BSK4 669 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 SLC2A4RGQ9NR83 387 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 RBM12Q9NTZ6 932 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 SLC27A6Q9Y2P4 619 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 DFFAO00273 331 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 MAFKO60675 156 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 BMP1P13497 986 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 OPRD1P41143 372 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 FNTAP49354 379 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 BYSLQ13895 437 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 PRKD1Q15139 912 aaPredicted RBP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 PLEKHG6Q3KR16 790 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 SLC45A4Q5BKX6 768 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 ZC3H18Q86VM9 953 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 ATPAF2Q8N5M1 289 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 CEP112Q8N8E3 955 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 NAT16Q8N8M0 369 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 DCAF4L2Q8NA75 395 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 MNS1Q8NEH6 495 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 FATE1Q969F0 183 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 MAGOHBQ96A72 148 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 LGMNQ99538 433 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 MUC3BQ9H195 1237 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 ABCB8Q9NUT2 735 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 DNAJC17Q9NVM6 304 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 GGA2Q9UJY4 613 aa16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 INTS6Q9UL03 887 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-202ENST00000455220 F5P12259 2224 aa16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 BCLAF3A2AJT9 711 aaKnown RBP16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 SRFP11831 508 aa16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 PABPC1P11940 636 aaKnown RBP16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 CHRNA3P32297 505 aa16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 DGKGP49619 791 aa16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 DMC1Q14565 340 aa16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 TTC27Q6P3X3 843 aa16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 ARHGAP36Q6ZRI8 547 aa16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 PHTF2Q8N3S3 785 aa16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 TTC8Q8TAM2 541 aa16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 TFB1MQ8WVM0 346 aaKnown RBP16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 ASB2Q96Q27 587 aa16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 ATP13A1Q9HD20 1204 aa16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 IPO11Q9UI26 975 aaKnown RBP16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 DRG1Q9Y295 367 aaKnown RBP16.97■□□□□ 0.31
CCDC90B-202ENST00000455220 CXorf51AA0A1B0GTR3 108 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 CTAGE15A4D2H0 777 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 H7C0C1 242 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 TRIM24O15164 1050 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 KDELR3O43731 214 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 NARSO43776 548 aaKnown RBP16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 ZNF189O75820 626 aaPredicted RBP16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 ITGAVP06756 1048 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 CTAGE8P0CG41 777 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 CCNCP24863 283 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 COILP38432 576 aaPredicted RBP16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 ATP5OP48047 213 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 SLC6A11P48066 632 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 PFKPQ01813 784 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 C2orf54Q08AI8 447 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 SNX1Q13596 522 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 FUT11Q495W5 492 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 PITRM1Q5JRX3 1037 aa16.96■□□□□ 0.31
CCDC90B-202ENST00000455220 CTAGE6Q86UF2 777 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms