RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 ARHGEF3Q9NR81 526 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 BPGMP07738 259 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
SMPD4-213ENST00000454468 CCR10P46092 362 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 NAGLUP54802 743 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 ZNF467Q7Z7K2 595 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-213ENST00000454468 SLC41A1Q8IVJ1 513 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 DENND6AQ8IWF6 608 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 RPRD1AQ96P16 312 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-213ENST00000454468 OSBPL1AQ9BXW6 950 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 TMLHEQ9NVH6 421 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 PAGE1O75459 146 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 GSTA2P09210 222 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 IRF1P10914 325 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 CCNB1P14635 433 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 PRKCZQ05513 592 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 WASHC5Q12768 1159 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 KHDC1Q4VXA5 237 aaKnown RBP12.22□□□□□ -0.45
SMPD4-213ENST00000454468 TCHHL1Q5QJ38 904 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-213ENST00000454468 CST9Q5W186 159 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 BLOC1S5Q8TDH9 187 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 MTBPQ96DY7 904 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 PHF21BQ96EK2 531 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 FCRL3Q96P31 734 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-213ENST00000454468 NPY6RQ99463 290 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 WDR55Q9H6Y2 383 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-213ENST00000454468 LRFN2Q9ULH4 789 aa12.22□□□□□ -0.45
SMPD4-213ENST00000454468 UBA6A0AVT1 1052 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-213ENST00000454468 FBXO21O94952 628 aa12.21□□□□□ -0.45
SMPD4-213ENST00000454468 ATN1P54259 1190 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-213ENST00000454468 PRAMEP78395 509 aa12.21□□□□□ -0.45
SMPD4-213ENST00000454468 CSHL1Q14406 222 aa12.21□□□□□ -0.45
SMPD4-213ENST00000454468 FAM171A1Q5VUB5 890 aa12.21□□□□□ -0.45
SMPD4-213ENST00000454468 ZNF470Q6ECI4 717 aa12.21□□□□□ -0.45
SMPD4-213ENST00000454468 PLD6Q8N2A8 252 aaKnown RBP12.21□□□□□ -0.45
SMPD4-213ENST00000454468 KCTD4Q8WVF5 259 aa12.21□□□□□ -0.45
SMPD4-213ENST00000454468 EMID1Q96A84 441 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-213ENST00000454468 LRRC39Q96DD0 335 aa12.21□□□□□ -0.45
SMPD4-213ENST00000454468 CADM1Q9BY67 442 aaKnown RBP12.21□□□□□ -0.45
SMPD4-213ENST00000454468 NUF2Q9BZD4 464 aa12.21□□□□□ -0.45
SMPD4-213ENST00000454468 TRPV6Q9H1D0 765 aa12.21□□□□□ -0.45
SMPD4-213ENST00000454468 TK2O00142 265 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 F9P00740 461 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 CHRNA1P02708 482 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 SLC5A3P53794 718 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 GSCP56915 257 aaPredicted RBP12.21□□□□□ -0.46
SMPD4-213ENST00000454468 SEMA5AQ13591 1074 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 GALNTL6Q49A17 601 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 ANKRD20A4Q4UJ75 823 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 FSTL4Q6MZW2 842 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 ZNF280DQ6N043 979 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 KIAA1841Q6NSI8 718 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 RGMBQ6NW40 437 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 LRRC8BQ6P9F7 803 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 FBXO27Q8NI29 283 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 EXOC2Q96KP1 924 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 FTHL17Q9BXU8 183 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 CNGB3Q9NQW8 809 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 GDAP2Q9NXN4 497 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 TAS2R1Q9NYW7 299 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 C15orf41Q9Y2V0 281 aa12.21□□□□□ -0.46
SMPD4-213ENST00000454468 A0A1W2PQH9 124 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 C2P06681 752 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 ENO3P13929 434 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-213ENST00000454468 WARSP23381 471 aaKnown RBP12.2□□□□□ -0.46
SMPD4-213ENST00000454468 CCR1P32246 355 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 MPP1Q00013 466 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 PRKD1Q15139 912 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-213ENST00000454468 FBXO48Q5FWF7 155 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 NAPEPLDQ6IQ20 393 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 LAYNQ6UX15 382 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 LMNTD2Q8IXW0 634 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 CFAP52Q8N1V2 620 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 SNX31Q8N9S9 440 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 ANKLE1Q8NAG6 615 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 OXCT2Q9BYC2 517 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-213ENST00000454468 C20orf27Q9GZN8 174 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 SARS2Q9NP81 518 aaKnown RBP12.2□□□□□ -0.46
SMPD4-213ENST00000454468 THAP1Q9NVV9 213 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 CDH9Q9ULB4 789 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 CRYL1Q9Y2S2 319 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 RBM47A0AV96 593 aaKnown RBP12.2□□□□□ -0.46
SMPD4-213ENST00000454468 CCDC189A1A4V9 331 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 MANSC4A6NHS7 340 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-213ENST00000454468 ENO4A6NNW6 628 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 HACD1B0YJ81 288 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 PROCP04070 461 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 ALDOAP04075 364 aaKnown RBP12.2□□□□□ -0.46
SMPD4-213ENST00000454468 T-ENOLP0DO92 83 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 KCNE1P15382 129 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 CALB2P22676 271 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 CCND3P30281 292 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-213ENST00000454468 FCGRTP55899 365 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 NME5P56597 212 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 PSMD5Q16401 504 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 PREPLQ4J6C6 727 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-213ENST00000454468 CTXN3Q4LDR2 81 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 TEX44Q53QW1 395 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 LRRTM3Q86VH5 581 aa12.2□□□□□ -0.46
SMPD4-213ENST00000454468 CHSY1Q86X52 802 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms