RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 AHCYL1O43865 530 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 GAS8O95995 478 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 MOCS2O96007 188 aaPredicted RBP16.27■□□□□ 0.19
SNX17-204ENST00000453453 CD48P09326 243 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 ZFXP17010 805 aaPredicted RBP16.27■□□□□ 0.19
SNX17-204ENST00000453453 PFKLP17858 780 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 GNAZP19086 355 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 SLCO1A2P46721 670 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 LBRQ14739 615 aaKnown RBP16.27■□□□□ 0.19
SNX17-204ENST00000453453 LRIT3Q3SXY7 679 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 ARHGAP15Q53QZ3 475 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 ZDHHC14Q8IZN3 488 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 HS6ST3Q8IZP7 471 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 TTC13Q8NBP0 860 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 PLD4Q96BZ4 506 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 SLC39A13Q96H72 371 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 NAF1Q96HR8 494 aaKnown RBP16.27■□□□□ 0.19
SNX17-204ENST00000453453 FCRL2Q96LA5 508 aaPredicted RBP16.27■□□□□ 0.19
SNX17-204ENST00000453453 RNF157Q96PX1 679 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 LRRC3Q9BY71 257 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 OSBPL2Q9H1P3 480 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 PIDD1Q9HB75 910 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 ZFATQ9P243 1243 aa16.27■□□□□ 0.19
SNX17-204ENST00000453453 CLUHO75153 1309 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 NDC80O14777 642 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 CREB3O43889 395 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 CST8O60676 142 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 PAGE1O75459 146 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 HMBSP08397 361 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 MBL2P11226 248 aaPredicted RBP16.26■□□□□ 0.19
SNX17-204ENST00000453453 CALB2P22676 271 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 DDX6P26196 483 aaKnown RBP eCLIP16.26■□□□□ 0.19
SNX17-204ENST00000453453 EPHA5P54756 1037 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 TPI1P60174 286 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 KLF1Q13351 362 aaPredicted RBP16.26■□□□□ 0.19
SNX17-204ENST00000453453 TAF11Q15544 211 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 LONRF1Q17RB8 773 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 BBS12Q6ZW61 710 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 TMEM150AQ86TG1 271 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 TDRPQ86YL5 185 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 PYROXD2Q8N2H3 581 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 ZNF398Q8TD17 642 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 ZNF483Q8TF39 744 aaPredicted RBP16.26■□□□□ 0.19
SNX17-204ENST00000453453 BTN2A3PQ96KV6 586 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 SFXN1Q9H9B4 322 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 TMPRSS4Q9NRS4 437 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 MTMR10Q9NXD2 777 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 OR12D3Q9UGF7 316 aa16.26■□□□□ 0.19
SNX17-204ENST00000453453 TMEM265A0A087WTH1 108 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 TRAV19A0A0A6YYK7 116 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 CCDC195A0A1B0GUA6 201 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 TCRBV7S2A1N4TA0A589 114 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 C2orf78A6NCI8 922 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 KCNU1A8MYU2 1149 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 APOL1O14791 398 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 IGLV3-27P01718 113 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 FESP07332 822 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 TAC1P20366 129 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 ALDH3A1P30838 453 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 HTR7P34969 479 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 HARS2P49590 506 aaKnown RBP16.25■□□□□ 0.19
SNX17-204ENST00000453453 CCNHP51946 323 aaPredicted RBP16.25■□□□□ 0.19
SNX17-204ENST00000453453 DYNLT1P63172 113 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 MMRN1Q13201 1228 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 RASA2Q15283 850 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 ZNF697Q5TEC3 545 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 GAREM2Q75VX8 874 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 ANKS1BQ7Z6G8 1248 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 FAF2Q96CS3 445 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 CSPG4P5Q96PW8 444 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 FRMD8P1Q9BZ68 369 aaPredicted RBP16.25■□□□□ 0.19
SNX17-204ENST00000453453 SIK2Q9H0K1 926 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 IGFLR1Q9H665 355 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 KCNK9Q9NPC2 374 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 HCFC1R1Q9NWW0 138 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 EURLQ9NYK6 297 aa16.25■□□□□ 0.19
SNX17-204ENST00000453453 A0A1W2PRU2 124 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 ZNF197O14709 1029 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 PRPF4O43172 522 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNX17-204ENST00000453453 RHOP08100 348 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 ACADSP16219 412 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 GOT1P17174 413 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 HDCP19113 662 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 ATP6V1C1P21283 382 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 TGM2P21980 687 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 HCAR3P49019 387 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 CYP4F8P98187 520 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 PPARDQ03181 441 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 TXNDC8Q6A555 127 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 CGB2Q6NT52 195 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 SMG7Q92540 1137 aaKnown RBP16.24■□□□□ 0.19
SNX17-204ENST00000453453 HERPUD2Q9BSE4 406 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 LMCD1Q9NZU5 365 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 DNMT3BQ9UBC3 853 aaKnown RBP16.24■□□□□ 0.19
SNX17-204ENST00000453453 ZMYM5Q9UJ78 669 aa16.24■□□□□ 0.19
SNX17-204ENST00000453453 SMG5Q9UPR3 1016 aaKnown RBP16.24■□□□□ 0.19
SNX17-204ENST00000453453 FAM47DPA6NHR8 397 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 SOBPA7XYQ1 873 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 APOC4-APOC2K7ER74 178 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 TP73O15350 636 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms