RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 PARP6Q2NL67 630 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 RANBP10Q6VN20 620 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 FAM43BQ6ZT52 329 aaPredicted RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 MAVSQ7Z434 540 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 PIP4P2Q8N4L2 257 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 SPATA22Q8NHS9 363 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 SP7Q8TDD2 431 aaPredicted RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 RSAD2Q8WXG1 361 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 CELF6Q96J87 481 aaKnown RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 WDCPQ9H6R7 721 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 MLXIPLQ9NP71 852 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 SLCO1B3Q9NPD5 702 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 ABI2Q9NYB9 513 aaPredicted RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 PSMC3IPQ9P2W1 217 aaPredicted RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 STAP1Q9ULZ2 295 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 SYNJ2BP-COX16A0A087WUM0 186 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 OR6C75A6NL08 312 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 ZNF195O14628 629 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 APRTP07741 180 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 TUBB3Q13509 450 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 LACTB2Q53H82 288 aaPredicted RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 FAM219BQ5XKK7 198 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 CXorf57Q6NSI4 855 aaKnown RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 MON1AQ86VX9 555 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 CIR1Q86X95 450 aaPredicted RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 MAP7D3Q8IWC1 876 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 LRRC39Q96DD0 335 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 SEC16BQ96JE7 1060 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 COX16Q9P0S2 106 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 HSFX1Q9UBD0 423 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 GGT7Q9UJ14 662 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 ZNF840PA6NDX5 716 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 SLC38A8A6NNN8 435 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 ANKRD65E5RJM6 399 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 H7C0C1 242 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 ZNF821O75541 412 aaPredicted RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 MT-CYBP00156 380 aaPredicted RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 NFKB1P19838 968 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 CR2P20023 1033 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 ATP5OP48047 213 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 KCNQ1P51787 676 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 MAPRE1Q15691 268 aaKnown RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 FBXL22Q6P050 247 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 ZNF449Q6P9G9 518 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 LILRA6Q6PI73 481 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 CAPN12Q6ZSI9 719 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 SRRM1Q8IYB3 904 aaKnown RBP6.74□□□□□ -1.33
USP46-202ENST00000451218 C4orf33Q8N1A6 199 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 ATP11CQ8NB49 1132 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 C10orf82Q8WW14 230 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 GPR78Q96P69 363 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 HERC2P3Q9BVR0 1158 aa6.74□□□□□ -1.33
USP46-202ENST00000451218 SNNO75324 88 aaPredicted RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 SPAG7O75391 227 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 MOSPD3O75425 235 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 CCNCP24863 283 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 MGAT1P26572 445 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 RING1Q06587 406 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 TAF10Q12962 218 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 GPS2Q13227 327 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 PSMD5Q16401 504 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 PDK4Q16654 411 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 TEDDM1Q5T9Z0 273 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 HACE1Q8IYU2 909 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 OR52K1Q8NGK4 314 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 OR13J1Q8NGT2 312 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 CLP1Q92989 425 aaKnown RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 CHMP6Q96FZ7 201 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 TRMT2BQ96GJ1 504 aaKnown RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 PRR11Q96HE9 360 aaPredicted RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 AGAP2Q99490 1192 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 KIFC1Q9BW19 673 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 ARNT2Q9HBZ2 717 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 EXOC1LA0A1B0GW35 172 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 C2orf78A6NCI8 922 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 MROH6A6NGR9 719 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 H3BRJ5 948 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 COCHO43405 550 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 USP12O75317 370 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 F9P00740 461 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 T-ENOLP0DO92 83 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 ADRA1DP25100 572 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 HTR7P34969 479 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 CORO7P57737 925 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 DUSP4Q13115 394 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 SETMARQ53H47 684 aaPredicted RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 CERCAMQ5T4B2 595 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 CNKSR3Q6P9H4 555 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 CCDC117Q8IWD4 279 aaPredicted RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 WFDC5Q8TCV5 224 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 HMCESQ96FZ2 354 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 KLF16Q9BXK1 252 aaPredicted RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 SIRPGQ9P1W8 387 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 MED16Q9Y2X0 877 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 CDY1Q9Y6F8 540 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 TTC24A2A3L6 582 aaPredicted RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 TRDMT1O14717 391 aaKnown RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 MATN3O15232 486 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 HSPA8P11142 646 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 561.8 ms