RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 PTPN3P26045 913 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 CHN2P52757 468 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 ADIGQ0VDE8 80 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 CEACAM7Q14002 265 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 DPYSQ14117 519 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 LSM12Q3MHD2 195 aaKnown RBP13.95□□□□□ -0.18
POLR1B-209ENST00000448770 MARCH8Q5T0T0 291 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 GRTP1Q5TC63 336 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 STRADAQ7RTN6 431 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 PID1Q7Z2X4 250 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 NME8Q8N427 588 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 SLC7A14Q8TBB6 771 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 USP13Q92995 863 aaPredicted RBP13.95□□□□□ -0.18
POLR1B-209ENST00000448770 SNX27Q96L92 541 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 NDNQ99608 321 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 CDHR5Q9HBB8 845 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 TCF7L2Q9NQB0 619 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 IGSF9Q9P2J2 1179 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 DCLK1O15075 740 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 TFAP2AP05549 437 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 PRDX6P30041 224 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 MATKP42679 507 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 SERPINB8P50452 374 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 CSRP3P50461 194 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 BCAT1P54687 386 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 NSUN2Q08J23 767 aaKnown RBP eCLIP13.95□□□□□ -0.18
POLR1B-209ENST00000448770 ZNF423Q2M1K9 1284 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 KIZQ2M2Z5 673 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 CCDC153Q494R4 210 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 DCAF6Q58WW2 860 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 SPANXN3Q5MJ09 141 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 TMEM135Q86UB9 458 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 URGCPQ8TCY9 931 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 FAM149B1Q96BN6 582 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 NMD3Q96D46 503 aaKnown RBP13.95□□□□□ -0.18
POLR1B-209ENST00000448770 NXF3Q9H4D5 531 aaKnown RBP13.95□□□□□ -0.18
POLR1B-209ENST00000448770 ZNF385DQ9H6B1 395 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 PIGVQ9NUD9 493 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 TXNDC16Q9P2K2 825 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 RIMS3Q9UJD0 308 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 GINS2Q9Y248 185 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 MATN2O00339 956 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 TOMM70O94826 608 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 TPH1P17752 444 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 PMLP29590 882 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 CDKL1Q00532 357 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 ZBTB17Q13105 803 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 TTLL12Q14166 644 aaPredicted RBP13.94□□□□□ -0.18
POLR1B-209ENST00000448770 EML3Q32P44 896 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 ZNF484Q5JVG2 852 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 C9orf57Q5W0N0 161 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 MOB2Q70IA6 237 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 BNIPLQ7Z465 357 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 PIGZQ86VD9 579 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 TICAM1Q8IUC6 712 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 DSELQ8IZU8 1212 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.94□□□□□ -0.18
POLR1B-209ENST00000448770 RCN3Q96D15 328 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 C1QTNF1Q9BXJ1 281 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 NUF2Q9BZD4 464 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 UNKQ9C0B0 810 aaKnown RBP13.94□□□□□ -0.18
POLR1B-209ENST00000448770 CHRAC1Q9NRG0 131 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 STK39Q9UEW8 545 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 ZDHHC2Q9UIJ5 367 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 PSMD13Q9UNM6 376 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 CDY2AQ9Y6F7 541 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 CDY1Q9Y6F8 540 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 TSC2P49815 1807 aa13.94□□□□□ -0.18
POLR1B-209ENST00000448770 TMEM233B4DJY2 109 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 VILLO15195 856 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 ZBTB24O43167 697 aaPredicted RBP13.93□□□□□ -0.18
POLR1B-209ENST00000448770 PHGDHO43175 533 aaKnown RBP13.93□□□□□ -0.18
POLR1B-209ENST00000448770 ATP9BO43861 1147 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 PEX1O43933 1283 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 AKAP5P24588 427 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 GLRBP48167 497 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 XIAPP98170 497 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 SLC5A9Q2M3M2 681 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 SLC25A52Q3SY17 297 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 PIGGQ5H8A4 983 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 KCTD11Q693B1 232 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 OSTM1Q86WC4 334 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 LSMEM2Q8N112 164 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 ARHGAP18Q8N392 663 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 TTC39CQ8N584 583 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 FAM156AQ8NDB6 213 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 PRICKLE1Q96MT3 831 aaPredicted RBP13.93□□□□□ -0.18
POLR1B-209ENST00000448770 KLHL32Q96NJ5 620 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 CATSPER2Q96P56 530 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 CDRT15Q96T59 188 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 C16orf70Q9BSU1 422 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 ELP3Q9H9T3 547 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 NMRAL1Q9HBL8 299 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 VANGL2Q9ULK5 521 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 SNX10Q9Y5X0 201 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 RALGAPA2Q2PPJ7 1873 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 AP1G1O43747 822 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 TRIM13O60858 407 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 ZBTB7AO95365 584 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms