RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 TGM2P21980 687 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 SERPINB6P35237 376 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 PAPOLAP51003 745 aaKnown RBP18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 GALK1P51570 392 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 NDST2P52849 883 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 KLF1Q13351 362 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 PON2Q15165 354 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 MLF2Q15773 248 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 LONRF2Q1L5Z9 754 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 FUT11Q495W5 492 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 ARHGAP36Q6ZRI8 547 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 TPRG1Q6ZUI0 275 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 B4GALNT4Q76KP1 1039 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 ZNF354CQ86Y25 554 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 LZTR1Q8N653 840 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 ARHGEF2Q92974 986 aaKnown RBP18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 ALG14Q96F25 216 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 PNKPQ96T60 521 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 FEM1AQ9BSK4 669 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 PRDM16Q9HAZ2 1276 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 DONSONQ9NYP3 566 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 OR51B4Q9Y5P0 310 aa18.43■□□□□ 0.54
TRAPPC4-203ENST00000447216 CES2O00748 559 aa18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 SNAP91O60641 907 aa18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 URI1O94763 535 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 GLDCP23378 1020 aa18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 YBEYP58557 167 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 OTUD4Q01804 1114 aaKnown RBP18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 PLEKHG6Q3KR16 790 aa18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 PITRM1Q5JRX3 1037 aa18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 TMEM215Q68D42 235 aa18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 IL31Q6EBC2 164 aa18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 RALGPS2Q86X27 583 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 ZNF557Q8N988 423 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 P2RY13Q9BPV8 354 aa18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 MAGEH1Q9H213 219 aa18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 ATP13A1Q9HD20 1204 aa18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 VPS28Q9UK41 221 aa18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 FBXL21Q9UKT6 434 aa18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 SLC27A6Q9Y2P4 619 aa18.42■□□□□ 0.54
TRAPPC4-203ENST00000447216 ANTXRLA6NF34 631 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 ARHGAP42A6NI28 874 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 SHISA7A6NL88 538 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 PRRT4C9JH25 899 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 APOC4-APOC2K7ER74 178 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 PGRMC1O00264 195 aaKnown RBP18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 KAT7O95251 611 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 APOC2P02655 101 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 CD72P21854 359 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 EIF2DP41214 584 aaKnown RBP18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 OXCT1P55809 520 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 GALNT2Q10471 571 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 SIX1Q15475 284 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 PARP15Q460N3 678 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 ZNF783Q6ZMS7 281 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 LEKR1Q6ZMV7 388 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 KIAA0907Q7Z7F0 614 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 ADIPOR2Q86V24 386 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 CREG2Q8IUH2 290 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 TERB1Q8NA31 727 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 KIF18AQ8NI77 898 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 ACTL9Q8TC94 416 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 ACTRT1Q8TDG2 376 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 ATG4AQ8WYN0 398 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 P3H4Q92791 437 aa18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 UHRF1Q96T88 793 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC4-203ENST00000447216 KRBA1A5PL33 1030 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 PDE2AO00408 941 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 APODP05090 189 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 CTSOP43234 321 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 PLK1P53350 603 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 SERINC3Q13530 473 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 SLC12A1Q13621 1099 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 NOMO1Q15155 1222 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 MBLAC2Q68D91 279 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 ZC3H18Q86VM9 953 aaKnown RBP18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 UBALD2Q8IYN6 164 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 AHI1Q8N157 1196 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 ATPAF2Q8N5M1 289 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 WFIKKN2Q8TEU8 576 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 C1orf54Q8WWF1 131 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 SORCS1Q8WY21 1168 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 AP1M1Q9BXS5 423 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 ACE2Q9BYF1 805 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 CIPCQ9C0C6 399 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 C10orf88Q9H8K7 445 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 ARHGEF3Q9NR81 526 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 VPS51Q9UID3 782 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 TTC7AQ9ULT0 858 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 ACTL7AQ9Y615 435 aa18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 MUC22E2RYF6 1773 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC4-203ENST00000447216 TBC1D3BA6NDS4 549 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 J3KR12 359 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 CBX4O00257 560 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 GLULP15104 373 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 POLR2EP19388 210 aaKnown RBP18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 ETFBP38117 255 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 GARSP41250 739 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms