RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ZSCAN5CA6NGD5 496 aaPredicted RBP14.45□□□□□ -0.1
SSBP3-208ENST00000444533 ARHGAP42A6NI28 874 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 WASH4PA8MWX3 477 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 CBX4O00257 560 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 PSTPIP1O43586 416 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 PAPSS2O95340 614 aaPredicted RBP14.45□□□□□ -0.1
SSBP3-208ENST00000444533 EPHX1P07099 455 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 GOT1P17174 413 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 COMTP21964 271 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 CETN2P41208 172 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 WASP42768 502 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 NDST2P52849 883 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 PTPN5P54829 565 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 SATB1Q01826 763 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 SLC20A2Q08357 652 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 CCDC173Q0VFZ6 552 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 SEMA3BQ13214 749 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 CA9Q16790 459 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 ACCSLQ4AC99 568 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 METTL3Q86U44 580 aaKnown RBP14.45□□□□□ -0.1
SSBP3-208ENST00000444533 NLRP14Q86W24 1093 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 APCDD1Q8J025 514 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 RNF10Q8N5U6 811 aaKnown RBP14.45□□□□□ -0.1
SSBP3-208ENST00000444533 TPCN2Q8NHX9 752 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 SORCS1Q8WY21 1168 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 ALS2CR12Q96Q35 445 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 FBRSQ9HAH7 460 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 PRMT8Q9NR22 394 aaPredicted RBP14.45□□□□□ -0.1
SSBP3-208ENST00000444533 ERVW-1Q9UQF0 538 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 REXO2Q9Y3B8 237 aaKnown RBP14.45□□□□□ -0.1
SSBP3-208ENST00000444533 ADGRG1Q9Y653 693 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 ALG6Q9Y672 507 aa14.45□□□□□ -0.1
SSBP3-208ENST00000444533 LRRD1A4D1F6 860 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 SGK1O00141 431 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 RNASEH1O60930 286 aaKnown RBP14.44□□□□□ -0.1
SSBP3-208ENST00000444533 KRT1P04264 644 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 TCF4P15884 667 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 ERCC2P18074 760 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 RECQLP46063 649 aaPredicted RBP14.44□□□□□ -0.1
SSBP3-208ENST00000444533 BYSLQ13895 437 aaKnown RBP14.44□□□□□ -0.1
SSBP3-208ENST00000444533 GAS6Q14393 721 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 ZNF528Q3MIS6 628 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 TMEM215Q68D42 235 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 CYP4V2Q6ZWL3 525 aaPredicted RBP14.44□□□□□ -0.1
SSBP3-208ENST00000444533 ATP11CQ8NB49 1132 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 UBE2Q2Q8WVN8 375 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 ATRIPQ8WXE1 791 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 LMLNQ96KR4 655 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 CSPG4P5Q96PW8 444 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 GABRG3Q99928 467 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 ZNF670Q9BS34 389 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 MAGEB5Q9BZ81 275 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 LACRTQ9GZZ8 138 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 PRDM16Q9HAZ2 1276 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 PCDH18Q9HCL0 1135 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 ZDHHC4Q9NPG8 344 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 CWC15Q9P013 229 aaKnown RBP14.44□□□□□ -0.1
SSBP3-208ENST00000444533 INTS6Q9UL03 887 aaKnown RBP14.44□□□□□ -0.1
SSBP3-208ENST00000444533 GUCA1BQ9UMX6 200 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 TFR2Q9UP52 801 aa14.44□□□□□ -0.1
SSBP3-208ENST00000444533 A0A0D9SEW6 157 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 EDDM13A0A1B0GTR0 161 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 CXorf51AA0A1B0GTR3 108 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 TCRBV21S2A2A0A5A6 115 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 RCCD1A6NED2 376 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 ZSCAN12O43309 604 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 ACADMP11310 421 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 ZFXP17010 805 aaPredicted RBP14.43□□□□□ -0.1
SSBP3-208ENST00000444533 IL12RB1P42701 662 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 CLCN6P51797 869 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 TAS2R40P59535 323 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 CCZ1BP86790 482 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 CCZ1P86791 482 aaPredicted RBP14.43□□□□□ -0.1
SSBP3-208ENST00000444533 SFSWAPQ12872 951 aaKnown RBP14.43□□□□□ -0.1
SSBP3-208ENST00000444533 PKN3Q6P5Z2 889 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 PEX26Q7Z412 305 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 DSG4Q86SJ6 1040 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 UMODL1-AS1Q8N2C9 162 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 UBL4BQ8N7F7 174 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 OR7D4Q8NG98 312 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 NSMCE1Q8WV22 266 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 RBM41Q96IZ5 413 aaKnown RBP14.43□□□□□ -0.1
SSBP3-208ENST00000444533 RPL10LQ96L21 214 aaKnown RBP14.43□□□□□ -0.1
SSBP3-208ENST00000444533 ZNF830Q96NB3 372 aaPredicted RBP14.43□□□□□ -0.1
SSBP3-208ENST00000444533 HHIPQ96QV1 700 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 VPS51Q9UID3 782 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 AMFRQ9UKV5 643 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 DUSP10Q9Y6W6 482 aa14.43□□□□□ -0.1
SSBP3-208ENST00000444533 CCDC163A0A0D9SF12 145 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 TARSL2A2RTX5 802 aaKnown RBP14.42□□□□□ -0.1
SSBP3-208ENST00000444533 CCDC66A2RUB6 948 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 RASA4BC9J798 803 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 DFFAO00273 331 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 RASA4O43374 803 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 ADAM23O75077 832 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 ZRANB2O95218 330 aaKnown RBP eCLIP14.42□□□□□ -0.1
SSBP3-208ENST00000444533 KDELR1P24390 212 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 HOXA6P31267 233 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 VASPP50552 380 aaPredicted RBP14.42□□□□□ -0.1
SSBP3-208ENST00000444533 DPYSQ14117 519 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms