RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 RXFP1Q9HBX9 757 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 PLK2Q9NYY3 685 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 PDP2Q9P2J9 529 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 SLC39A10Q9ULF5 831 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 SCN9AQ15858 1988 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 MYBPHLA2RUH7 354 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 RNF103O00237 685 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 MAP3K13O43283 966 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 HDCP19113 662 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 TGM2P21980 687 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 USP10Q14694 798 aaKnown RBP10.81□□□□□ -0.68
TOP3B-210ENST00000444502 RNASEH2BQ5TBB1 312 aaKnown RBP10.81□□□□□ -0.68
TOP3B-210ENST00000444502 TAPT1Q6NXT6 567 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 DCLRE1AQ6PJP8 1040 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 WWP1Q9H0M0 922 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 MYLK2Q9H1R3 596 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 SLC17A7Q9P2U7 560 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 OR12D3Q9UGF7 316 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 CDH9Q9ULB4 789 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 NENFQ9UMX5 172 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 ADAMTS5Q9UNA0 930 aa10.81□□□□□ -0.68
TOP3B-210ENST00000444502 TCRBV7S3A2A0A539 114 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 TCRBV9S1A1TA0A576 114 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 MYADML2A6NDP7 307 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 A6NHS1 94 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 MSI1O43347 362 aaKnown RBP10.8□□□□□ -0.68
TOP3B-210ENST00000444502 F2P00734 622 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 CCL5P13501 91 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 SERPINB9P50453 376 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 KPNA2P52292 529 aaKnown RBP10.8□□□□□ -0.68
TOP3B-210ENST00000444502 OXCT1P55809 520 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 CA9Q16790 459 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 USP41Q3LFD5 358 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 RABGAP1LQ5R372 815 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 RAP1GAP2Q684P5 730 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 REM2Q8IYK8 340 aaPredicted RBP10.8□□□□□ -0.68
TOP3B-210ENST00000444502 WNT8BQ93098 351 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 OCEL1Q9H607 264 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 ARMCX1Q9P291 453 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 TLL2Q9Y6L7 1015 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 SNX2O60749 519 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 RAMP2O60895 175 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 ATP6V1B1P15313 513 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 OCRLQ01968 901 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 ARHGEF7Q14155 803 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 POU6F1Q14863 301 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 PCBP1Q15365 356 aaKnown RBP eCLIP10.8□□□□□ -0.685e-6■■■□□ 18.2
TOP3B-210ENST00000444502 MTFR1Q15390 333 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 ZRANB3Q5FWF4 1079 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 TMTC4Q5T4D3 741 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 C1orf146Q5VVC0 180 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 ZNF467Q7Z7K2 595 aaPredicted RBP10.8□□□□□ -0.68
TOP3B-210ENST00000444502 PYROXD2Q8N2H3 581 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 RSPH1Q8WYR4 309 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 KCNK16Q96T55 309 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 CHST12Q9NRB3 414 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 SLC45A1Q9Y2W3 748 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 MOXD2PA6NHM9 499 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 NDUFS3O75489 264 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 CXCL14O95715 111 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 RPL9P32969 192 aaKnown RBP10.8□□□□□ -0.68
TOP3B-210ENST00000444502 SIX1Q15475 284 aaPredicted RBP10.8□□□□□ -0.68
TOP3B-210ENST00000444502 VSTM1Q6UX27 236 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 RINLQ6ZS11 566 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 WDTC1Q8N5D0 677 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 PLD5Q8N7P1 536 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 OLFM3Q96PB7 478 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 TTPALQ9BTX7 342 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 THTPAQ9BU02 230 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 TMEM120AQ9BXJ8 343 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 NDEL1Q9GZM8 345 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 ACSS3Q9H6R3 686 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 ATP13A1Q9HD20 1204 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 NMRK1Q9NWW6 199 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 GRID1Q9ULK0 1009 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 PTPRZ1P23471 2315 aaPredicted RBP10.8□□□□□ -0.68
TOP3B-210ENST00000444502 TMEM63AO94886 807 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 CKBP12277 381 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 NOS2P35228 1153 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 SEC14L1Q92503 715 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 SERPINB11Q96P15 392 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 FRMD8Q9BZ67 464 aaPredicted RBP10.8□□□□□ -0.68
TOP3B-210ENST00000444502 BRD8Q9H0E9 1235 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 XYLT2Q9H1B5 865 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 PRDM12Q9H4Q4 367 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 PGAP2Q9UHJ9 254 aa10.8□□□□□ -0.68
TOP3B-210ENST00000444502 TRIM43BA6NCK2 446 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 SRRM3A6NNA2 597 aaPredicted RBP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 STX7O15400 261 aaKnown RBP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 PAPSS1O43252 624 aaPredicted RBP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 ADCY6O43306 1168 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 ABHD2P08910 425 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 TAC1P20366 129 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 KCNA4P22459 653 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 FDFT1P37268 417 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 GLRBP48167 497 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 RHOAP61586 193 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 CYLC2Q14093 348 aaPredicted RBP10.79□□□□□ -0.68
TOP3B-210ENST00000444502 NOMO1Q15155 1222 aa10.79□□□□□ -0.68
TOP3B-210ENST00000444502 NAPEPLDQ6IQ20 393 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms