RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 LSM8O95777 96 aaKnown RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 IGLV3-25P01717 112 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 FYNP06241 537 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 C1SP09871 688 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 SLC9A1P19634 815 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 ACSL1P33121 698 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 ETFBP38117 255 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 RECQLP46063 649 aaPredicted RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 ARRB1P49407 418 aaPredicted RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 CAMK4Q16566 473 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 ACCSLQ4AC99 568 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 FKBP15Q5T1M5 1219 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 C9orf64Q5T6V5 341 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 SYPL2Q5VXT5 272 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 NEK5Q6P3R8 708 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 ZNF783Q6ZMS7 281 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 SLC26A9Q7LBE3 791 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 SETD3Q86TU7 594 aaPredicted RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 MMAAQ8IVH4 418 aaKnown RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 CFAP52Q8N1V2 620 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 BIRC7Q96CA5 298 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 C18orf8Q96DM3 657 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 ERLEC1Q96DZ1 483 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 LMLNQ96KR4 655 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 C1orf74Q96LT6 269 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 TUBGCP2Q9BSJ2 902 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 C2orf49Q9BVC5 232 aaPredicted RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 NUCKS1Q9H1E3 243 aaKnown RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 C6orf106Q9H6K1 298 aaPredicted RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 GDF3Q9NR23 364 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 PCOLCE2Q9UKZ9 415 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 PI4KAP42356 2102 aa8□□□□□ -1.13
CD44-211ENST00000442151 TBC1D3DA0A087WVF3 549 aa8□□□□□ -1.13
CD44-211ENST00000442151 TBC1D3IA0A087WXS9 549 aa8□□□□□ -1.13
CD44-211ENST00000442151 TBC1D3EA0A087X179 549 aa8□□□□□ -1.13
CD44-211ENST00000442151 TBC1D3KA0A087X1G2 549 aa8□□□□□ -1.13
CD44-211ENST00000442151 TBC1D3FA6NER0 549 aaPredicted RBP8□□□□□ -1.13
CD44-211ENST00000442151 TBC1D3LB9A6J9 549 aa8□□□□□ -1.13
CD44-211ENST00000442151 GOLGA6L22H0YM25 854 aa8□□□□□ -1.13
CD44-211ENST00000442151 M0QYT0 321 aa8□□□□□ -1.13
CD44-211ENST00000442151 HYAL3O43820 417 aaPredicted RBP8□□□□□ -1.13
CD44-211ENST00000442151 IL1BP01584 269 aa8□□□□□ -1.13
CD44-211ENST00000442151 ITGAVP06756 1048 aa8□□□□□ -1.13
CD44-211ENST00000442151 TBC1D3HP0C7X1 549 aa8□□□□□ -1.13
CD44-211ENST00000442151 FTH1P19P0C7X4 201 aa8□□□□□ -1.13
CD44-211ENST00000442151 EEF1GP26641 437 aaKnown RBP8□□□□□ -1.13
CD44-211ENST00000442151 CD38P28907 300 aa8□□□□□ -1.13
CD44-211ENST00000442151 CSNK1EP49674 416 aaKnown RBP8□□□□□ -1.13
CD44-211ENST00000442151 GALCP54803 685 aa8□□□□□ -1.13
CD44-211ENST00000442151 GEMIN4P57678 1058 aaKnown RBP8□□□□□ -1.13
CD44-211ENST00000442151 DEUP1Q05D60 604 aa8□□□□□ -1.13
CD44-211ENST00000442151 NME3Q13232 169 aa8□□□□□ -1.13
CD44-211ENST00000442151 STAT4Q14765 748 aa8□□□□□ -1.13
CD44-211ENST00000442151 ARL13BQ3SXY8 428 aa8□□□□□ -1.13
CD44-211ENST00000442151 C6orf118Q5T5N4 469 aa8□□□□□ -1.13
CD44-211ENST00000442151 TBC1D3GQ6DHY5 549 aa8□□□□□ -1.13
CD44-211ENST00000442151 TBC1D3CQ6IPX1 549 aa8□□□□□ -1.13
CD44-211ENST00000442151 TRIM72Q6ZMU5 477 aa8□□□□□ -1.13
CD44-211ENST00000442151 IQCHQ86VS3 1027 aa8□□□□□ -1.13
CD44-211ENST00000442151 TBC1D3Q8IZP1 549 aaPredicted RBP8□□□□□ -1.13
CD44-211ENST00000442151 CCAR2Q8N163 923 aaKnown RBP8□□□□□ -1.13
CD44-211ENST00000442151 OR14C36Q8NHC7 312 aa8□□□□□ -1.13
CD44-211ENST00000442151 C1orf216Q8TAB5 229 aa8□□□□□ -1.13
CD44-211ENST00000442151 ADAM32Q8TC27 787 aa8□□□□□ -1.13
CD44-211ENST00000442151 ZCCHC14Q8WYQ9 949 aaKnown RBP8□□□□□ -1.13
CD44-211ENST00000442151 PGAP3Q96FM1 320 aaPredicted RBP8□□□□□ -1.13
CD44-211ENST00000442151 MUC3BQ9H195 1237 aa8□□□□□ -1.13
CD44-211ENST00000442151 NUP62CLQ9H1M0 184 aa8□□□□□ -1.13
CD44-211ENST00000442151 NEUROG2Q9H2A3 272 aa8□□□□□ -1.13
CD44-211ENST00000442151 CLSTN2Q9H4D0 955 aa8□□□□□ -1.13
CD44-211ENST00000442151 ERVMER34-1Q9H9K5 563 aa8□□□□□ -1.13
CD44-211ENST00000442151 AASDHPPTQ9NRN7 309 aa8□□□□□ -1.13
CD44-211ENST00000442151 DONSONQ9NYP3 566 aa8□□□□□ -1.13
CD44-211ENST00000442151 ZMIZ1Q9ULJ6 1067 aa8□□□□□ -1.13
CD44-211ENST00000442151 WASF3Q9UPY6 502 aa8□□□□□ -1.13
CD44-211ENST00000442151 ACACBO00763 2458 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 CXorf51AA0A1B0GTR3 108 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 FAM47DPA6NHR8 397 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 ATP9BO43861 1147 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 RHOCP08134 193 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 CCDC172P0C7W6 258 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 PDGFRAP16234 1089 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 CTSKP43235 329 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 RPIAP49247 311 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 SGSHP51688 502 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 AUHQ13825 339 aaKnown RBP7.99□□□□□ -1.13
CD44-211ENST00000442151 SYCP1Q15431 976 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 TSR1Q2NL82 804 aaKnown RBP7.99□□□□□ -1.13
CD44-211ENST00000442151 KIF19Q2TAC6 998 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 SETMARQ53H47 684 aaPredicted RBP7.99□□□□□ -1.13
CD44-211ENST00000442151 RETSATQ6NUM9 610 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 PPP1R2P3Q6NXS1 205 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 ARCQ7LC44 396 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 DCP2Q8IU60 420 aaKnown RBP7.99□□□□□ -1.13
CD44-211ENST00000442151 FAM71AQ8IYT1 594 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 TMEM151AQ8N4L1 468 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 CHCHD4Q8N4Q1 142 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 MFSD2AQ8NA29 543 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 GATA6Q92908 595 aa7.99□□□□□ -1.13
CD44-211ENST00000442151 PPP1R16AQ96I34 528 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms