RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 CFAP52Q8N1V2 620 aa18.75■□□□□ 0.59
SMPD4-210ENST00000441135 KDM1BQ8NB78 822 aa18.75■□□□□ 0.59
SMPD4-210ENST00000441135 RPRD1AQ96P16 312 aaPredicted RBP18.75■□□□□ 0.59
SMPD4-210ENST00000441135 PPP1R9BQ96SB3 815 aa18.75■□□□□ 0.59
SMPD4-210ENST00000441135 TRIM5Q9C035 493 aa18.75■□□□□ 0.59
SMPD4-210ENST00000441135 RBSNQ9H1K0 784 aa18.75■□□□□ 0.59
SMPD4-210ENST00000441135 PCED1AQ9H1Q7 454 aa18.75■□□□□ 0.59
SMPD4-210ENST00000441135 CAPN10Q9HC96 672 aa18.75■□□□□ 0.59
SMPD4-210ENST00000441135 ANLNQ9NQW6 1124 aa18.75■□□□□ 0.59
SMPD4-210ENST00000441135 ARHGAP20Q9P2F6 1191 aa18.75■□□□□ 0.59
SMPD4-210ENST00000441135 SUN2Q9UH99 717 aa18.75■□□□□ 0.59
SMPD4-210ENST00000441135 LAMA1P25391 3075 aa18.75■□□□□ 0.59
SMPD4-210ENST00000441135 CNOT1A5YKK6 2376 aaKnown RBP18.74■□□□□ 0.59
SMPD4-210ENST00000441135 DRGXA6NNA5 263 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 TMCO5BA8MYB1 307 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 H0Y626 953 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 MOCS3O95396 460 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 GJB6O95452 261 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 GNSP15586 552 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 ADRA1BP35368 520 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 PLK1P53350 603 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 ATXN3P54252 364 aaPredicted RBP18.74■□□□□ 0.59
SMPD4-210ENST00000441135 CDH4P55283 916 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 RPL7AP62424 266 aaKnown RBP18.74■□□□□ 0.59
SMPD4-210ENST00000441135 TBX2Q13207 712 aaPredicted RBP18.74■□□□□ 0.59
SMPD4-210ENST00000441135 MAPK8IP2Q13387 824 aaPredicted RBP18.74■□□□□ 0.59
SMPD4-210ENST00000441135 TSR1Q2NL82 804 aaKnown RBP18.74■□□□□ 0.59
SMPD4-210ENST00000441135 PITRM1Q5JRX3 1037 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 LRRC31Q6UY01 552 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 CACUL1Q86Y37 369 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 CCAR2Q8N163 923 aaKnown RBP18.74■□□□□ 0.59
SMPD4-210ENST00000441135 FAM172AQ8WUF8 416 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 IGSF8Q969P0 613 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 GPR174Q9BXC1 333 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 OSBPL2Q9H1P3 480 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 MRPL47Q9HD33 250 aaKnown RBP18.74■□□□□ 0.59
SMPD4-210ENST00000441135 PRSS16Q9NQE7 514 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 ZNHIT6Q9NWK9 470 aaKnown RBP18.74■□□□□ 0.59
SMPD4-210ENST00000441135 PPARGC1AQ9UBK2 798 aaKnown RBP18.74■□□□□ 0.59
SMPD4-210ENST00000441135 CNOT8Q9UFF9 292 aaKnown RBP18.74■□□□□ 0.59
SMPD4-210ENST00000441135 VANGL2Q9ULK5 521 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 NENFQ9UMX5 172 aa18.74■□□□□ 0.59
SMPD4-210ENST00000441135 TMEM191CA6NGB0 347 aa18.73■□□□□ 0.59
SMPD4-210ENST00000441135 MEI4A8MW99 385 aa18.73■□□□□ 0.59
SMPD4-210ENST00000441135 KCNK5O95279 499 aa18.73■□□□□ 0.59
SMPD4-210ENST00000441135 PLEKP08567 350 aaPredicted RBP18.73■□□□□ 0.59
SMPD4-210ENST00000441135 MAPK8P45983 427 aa18.73■□□□□ 0.59
SMPD4-210ENST00000441135 CDO1Q16878 200 aa18.73■□□□□ 0.59
SMPD4-210ENST00000441135 TTC31Q49AM3 519 aaPredicted RBP18.73■□□□□ 0.59
SMPD4-210ENST00000441135 ALKBH5Q6P6C2 394 aaKnown RBP18.73■□□□□ 0.59
SMPD4-210ENST00000441135 RGL4Q8IZJ4 473 aa18.73■□□□□ 0.59
SMPD4-210ENST00000441135 ZNF366Q8N895 744 aa18.73■□□□□ 0.59
SMPD4-210ENST00000441135 ZNF653Q96CK0 615 aa18.73■□□□□ 0.59
SMPD4-210ENST00000441135 MRFAP1L1Q96HT8 127 aa18.73■□□□□ 0.59
SMPD4-210ENST00000441135 NCAPGQ9BPX3 1015 aa18.73■□□□□ 0.59
SMPD4-210ENST00000441135 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.73■□□□□ 0.59
SMPD4-210ENST00000441135 SIK2Q9H0K1 926 aa18.73■□□□□ 0.59
SMPD4-210ENST00000441135 ABHD10Q9NUJ1 306 aa18.73■□□□□ 0.59
SMPD4-210ENST00000441135 INTS6Q9UL03 887 aaKnown RBP18.73■□□□□ 0.59
SMPD4-210ENST00000441135 TBC1D30Q9Y2I9 924 aa18.73■□□□□ 0.59
SMPD4-210ENST00000441135 DOCK4Q8N1I0 1966 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 A0A087X0T9 212 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 CCP110O43303 1012 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 SRPRAP08240 638 aaKnown RBP18.72■□□□□ 0.59
SMPD4-210ENST00000441135 SYPP08247 313 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 FAM228BP0C875 321 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 CSRP1P21291 193 aaKnown RBP18.72■□□□□ 0.59
SMPD4-210ENST00000441135 VASPP50552 380 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-210ENST00000441135 NOVA1P51513 510 aaKnown RBP18.72■□□□□ 0.59
SMPD4-210ENST00000441135 ASTE1Q2TB18 679 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-210ENST00000441135 HNRNPA1L2Q32P51 320 aaKnown RBP18.72■□□□□ 0.59
SMPD4-210ENST00000441135 PLEKHG6Q3KR16 790 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 FSCBQ5H9T9 825 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 ARTNQ5T4W7 220 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 SH3PXD2AQ5TCZ1 1133 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 MANEALQ5VSG8 457 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 ZNF776Q68DI1 518 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-210ENST00000441135 CXorf57Q6NSI4 855 aaKnown RBP18.72■□□□□ 0.59
SMPD4-210ENST00000441135 C14orf80Q86SX3 495 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 GAS2L3Q86XJ1 694 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 DNASE2BQ8WZ79 361 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 MYO19Q96H55 970 aa18.72■□□□□ 0.59
SMPD4-210ENST00000441135 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.71■□□□□ 0.59
SMPD4-210ENST00000441135 E9PAM4 449 aa18.71■□□□□ 0.59
SMPD4-210ENST00000441135 DNTTP04053 509 aa18.71■□□□□ 0.59
SMPD4-210ENST00000441135 RPS14P62263 151 aaKnown RBP18.71■□□□□ 0.59
SMPD4-210ENST00000441135 ECT2LQ008S8 904 aa18.71■□□□□ 0.59
SMPD4-210ENST00000441135 SULT2A1Q06520 285 aa18.71■□□□□ 0.59
SMPD4-210ENST00000441135 ZNF177Q13360 481 aaPredicted RBP18.71■□□□□ 0.59
SMPD4-210ENST00000441135 ACAP1Q15027 740 aa18.71■□□□□ 0.59
SMPD4-210ENST00000441135 SLC18A3Q16572 532 aa18.71■□□□□ 0.59
SMPD4-210ENST00000441135 UAP1L1Q3KQV9 507 aa18.71■□□□□ 0.59
SMPD4-210ENST00000441135 RNF219Q5W0B1 726 aaPredicted RBP18.71■□□□□ 0.59
SMPD4-210ENST00000441135 PSAPL1Q6NUJ1 521 aa18.71■□□□□ 0.59
SMPD4-210ENST00000441135 TMC6Q7Z403 805 aa18.71■□□□□ 0.59
SMPD4-210ENST00000441135 SETD3Q86TU7 594 aaPredicted RBP18.71■□□□□ 0.59
SMPD4-210ENST00000441135 MRGPRX3Q96LB0 322 aa18.71■□□□□ 0.59
SMPD4-210ENST00000441135 GTPBP2Q9BX10 602 aaKnown RBP18.71■□□□□ 0.59
SMPD4-210ENST00000441135 RSPH9Q9H1X1 276 aaPredicted RBP18.71■□□□□ 0.59
SMPD4-210ENST00000441135 SCML1Q9UN30 329 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms