RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 LINC00523Q86TU6 105 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 MON1AQ86VX9 555 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 TMEM173Q86WV6 379 aaPredicted RBP13.12□□□□□ -0.31
DDX56-204ENST00000431640 BCL7CQ8WUZ0 217 aaPredicted RBP13.12□□□□□ -0.31
DDX56-204ENST00000431640 ATP2A3Q93084 1043 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 C8orf48Q96LL4 319 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 TEKT5Q96M29 485 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 TUBB6Q9BUF5 446 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 FBXO44Q9H4M3 255 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 CASS4Q9NQ75 786 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 TXLNGQ9NUQ3 528 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 DONSONQ9NYP3 566 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 FNIP2Q9P278 1114 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 TXNDC16Q9P2K2 825 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 DCDC2Q9UHG0 476 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 AAR2Q9Y312 384 aaKnown RBP13.12□□□□□ -0.31
DDX56-204ENST00000431640 NR2E3Q9Y5X4 410 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 VWA8A3KMH1 1905 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 CHD7Q9P2D1 2997 aa13.12□□□□□ -0.31
DDX56-204ENST00000431640 TBKBP1A7MCY6 615 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 ZBTB24O43167 697 aaPredicted RBP13.11□□□□□ -0.31
DDX56-204ENST00000431640 TADA2AO75478 443 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 FGBP02675 491 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 RASSF2P50749 326 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 SLC5A3P53794 718 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 NRG1Q02297 640 aaPredicted RBP13.11□□□□□ -0.31
DDX56-204ENST00000431640 NIPAL4Q0D2K0 466 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 CRYMQ14894 314 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 FAM182AQ5T1J6 154 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 RASIP1Q5U651 963 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 CCDC91Q7Z6B0 441 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 NUP93Q8N1F7 819 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 SCAMP5Q8TAC9 235 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 C10orf82Q8WW14 230 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 HERVK_113Q902F9 699 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 SPOCK2Q92563 424 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 C1orf74Q96LT6 269 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 RMDN2Q96LZ7 410 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 TMEM209Q96SK2 561 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 CWH43Q9H720 699 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 MARCH5Q9NX47 278 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 LRFN2Q9ULH4 789 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 SCML2Q9UQR0 700 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 MTO1Q9Y2Z2 717 aaKnown RBP13.11□□□□□ -0.31
DDX56-204ENST00000431640 ARHGAP42A6NI28 874 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 ZBBXA8MT70 800 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 UGT1A9O60656 530 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 HNRNPCL1O60812 293 aaKnown RBP13.11□□□□□ -0.31
DDX56-204ENST00000431640 USP1O94782 785 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 AMHP03971 560 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 HOXC13P31276 330 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 MAGEA11P43364 429 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 OR1G1P47890 313 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 SLC11A1P49279 550 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 NCALDP61601 193 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 INSCQ1MX18 579 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 MROH9Q5TGP6 573 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 KCTD11Q693B1 232 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 FAM109BQ6ICB4 259 aaPredicted RBP13.11□□□□□ -0.31
DDX56-204ENST00000431640 NAPEPLDQ6IQ20 393 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 RWDD4Q6NW29 188 aaKnown RBP13.11□□□□□ -0.31
DDX56-204ENST00000431640 CYB5D1Q6P9G0 228 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 PSRC1Q6PGN9 363 aaPredicted RBP13.11□□□□□ -0.31
DDX56-204ENST00000431640 PACS1Q6VY07 963 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 TMEM135Q86UB9 458 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 SCN4BQ8IWT1 228 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 NDUFAF2Q8N183 169 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 NPWQ8N729 165 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 DNAAF3Q8N9W5 541 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 KLHL29Q96CT2 875 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 TBC1D31Q96DN5 1066 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 SERPINB11Q96P15 392 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 CPNE1Q99829 537 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 CEP41Q9BYV8 373 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 SLC13A1Q9BZW2 595 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 IL22Q9GZX6 179 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 UGT1A7Q9HAW7 530 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 UGT1A10Q9HAW8 530 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 UGT1A8Q9HAW9 530 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 SYBUQ9NX95 663 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 ZFATQ9P243 1243 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 ADAM28Q9UKQ2 775 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 VANGL2Q9ULK5 521 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 RPS6KL1Q9Y6S9 549 aa13.11□□□□□ -0.31
DDX56-204ENST00000431640 PTPRDP23468 1912 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 PATJQ8NI35 1801 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 FAM237BA0A1B0GVD1 139 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 CACNG3O60359 315 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 PAGE1O75459 146 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 ANXA9O76027 345 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 ARHGEF15O94989 841 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 JCHAINP01591 159 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 CCNB1P14635 433 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 SPRP35270 261 aaPredicted RBP13.1□□□□□ -0.31
DDX56-204ENST00000431640 GP5P40197 560 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 CDK18Q07002 472 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 SLC39A12Q504Y0 691 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 ACBD5Q5T8D3 534 aaPredicted RBP13.1□□□□□ -0.31
DDX56-204ENST00000431640 TIGD7Q6NT04 549 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms