RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 SERPINI1Q99574 410 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 EIF2AQ9BY44 585 aaKnown RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 PHIPQ8WWQ0 1821 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 RGSL1A5PLK6 1076 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 TOMM70O94826 608 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 SPATA31D3P0C874 917 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 PABPC4LP0CB38 370 aaKnown RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 MATKP42679 507 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 GRIA4P48058 902 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 LIMK2P53671 638 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 BTKQ06187 659 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 CYLC2Q14093 348 aaPredicted RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 PDCD2Q16342 344 aaPredicted RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 ARL13AQ5H913 290 aaPredicted RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 SYPL2Q5VXT5 272 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 UGT2A3Q6UWM9 527 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 SPATA31D4Q6ZUB0 917 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 CATSPER4Q7RTX7 472 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 SGF29Q96ES7 293 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 MPP4Q96JB8 637 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 C11orf84Q9BUA3 381 aaPredicted RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 UBE2OQ9C0C9 1292 aaKnown RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 STK39Q9UEW8 545 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 PSMD13Q9UNM6 376 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 RUVBL2Q9Y230 463 aaKnown RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 COMMD3-BMI1R4GMX3 469 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 RGPD3A6NKT7 1758 aaPredicted RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 RGPD4Q7Z3J3 1758 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 EVPLQ92817 2033 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 KLHL33A6NCF5 533 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 FAM72CH0Y354 149 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 ZBTB24O43167 697 aaPredicted RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 CLPTM1O96005 669 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 ALOX15P16050 662 aaPredicted RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 TFEBP19484 476 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 ACAT1P24752 427 aaKnown RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 NAB1Q13506 487 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 GK3PQ14409 553 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 USP10Q14694 798 aaKnown RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 KYAT1Q16773 422 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 FAM72AQ5TYM5 149 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 SEL1L3Q68CR1 1132 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 FAM72DQ6L9T8 149 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 BNC2Q6ZN30 1099 aaPredicted RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 RBM44Q6ZP01 1051 aaKnown RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 FAM72BQ86X60 149 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 PSTKQ8IV42 348 aaKnown RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 B4GALNT2Q8NHY0 566 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 ZSCAN18Q8TBC5 510 aaPredicted RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 HIC2Q96JB3 615 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 APBA2Q99767 749 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 CCDC28BQ9BUN5 200 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 ACE2Q9BYF1 805 aaPredicted RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 NFKBIZQ9BYH8 718 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 OCEL1Q9H607 264 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 GOLGA2P5Q9HBQ8 144 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 LRRC4Q9HBW1 653 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 LZTS1Q9Y250 596 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 MRPL42Q9Y6G3 142 aaKnown RBP7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 USP3Q9Y6I4 520 aa7.68□□□□□ -1.18
SMARCC1-202ENST00000425518 ZNF487B1APH4 448 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 CYP2C8P10632 490 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 ERCC2P18074 760 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 XIAPP98170 497 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 MS4A2Q01362 244 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 ITGA7Q13683 1181 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 MAP7Q14244 749 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 SLC25A52Q3SY17 297 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 C16orf89Q6UX73 402 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 STRADAQ7RTN6 431 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 ARHGAP22Q7Z5H3 698 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 PTAR1Q7Z6K3 402 aaPredicted RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 KCNMB4Q86W47 210 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 BHLHE22Q8NFJ8 381 aaPredicted RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 SLC7A14Q8TBB6 771 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 USP33Q8TEY7 942 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 VPS39Q96JC1 886 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 DNAJC1Q96KC8 554 aaKnown RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 CAMKK2Q96RR4 588 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 OMDQ99983 421 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 MAF1Q9H063 256 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 DDX18Q9NVP1 670 aaKnown RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 UBAP1Q9NZ09 502 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 FER1L6Q2WGJ9 1857 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 ANKRD33BA6NCL7 494 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 SPTLC1O15269 473 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 HDAC3O15379 428 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 DNAJA2O60884 412 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 MPOP05164 745 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 SRGAP2BP0DMP2 458 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 PTPN3P26045 913 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 GRM5P41594 1212 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 GLUD2P49448 558 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 RPL14P50914 215 aaKnown RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 LSAMPQ13449 338 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 GRM3Q14832 879 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 LRRC23Q53EV4 343 aaPredicted RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 RARS2Q5T160 578 aaKnown RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 C6orf52Q5T4I8 152 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 ARHGAP17Q68EM7 881 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms