RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 NADSYN1Q6IA69 706 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 PDZD4Q76G19 769 aaPredicted RBP15.38■□□□□ 0.05
CALD1-206ENST00000424922 PIGWQ7Z7B1 504 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 TDHQ8IZJ6 230 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 MAB21L3Q8N8X9 362 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 PLD4Q96BZ4 506 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 CABS1Q96KC9 395 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 C9orf72Q96LT7 481 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 LGMNQ99538 433 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 KLF16Q9BXK1 252 aaPredicted RBP15.38■□□□□ 0.05
CALD1-206ENST00000424922 NSRP1Q9H0G5 558 aaKnown RBP15.38■□□□□ 0.05
CALD1-206ENST00000424922 TLE6Q9H808 572 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 USP29Q9HBJ7 922 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 SAYSD1Q9NPB0 183 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 FARP1Q9Y4F1 1045 aaPredicted RBP15.38■□□□□ 0.05
CALD1-206ENST00000424922 C2orf16Q68DN1 1984 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 BCLAF3A2AJT9 711 aaKnown RBP15.38■□□□□ 0.05
CALD1-206ENST00000424922 RFXAPO00287 272 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 FGF10O15520 208 aaPredicted RBP15.38■□□□□ 0.05
CALD1-206ENST00000424922 KCNN4O15554 427 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 CDC25CP30307 473 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 STIP1P31948 543 aaKnown RBP15.38■□□□□ 0.05
CALD1-206ENST00000424922 IFT88Q13099 833 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 SLC45A4Q5BKX6 768 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 CENPUQ71F23 418 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 DENND1CQ8IV53 801 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 ZNF683Q8IZ20 524 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 PRCCQ92733 491 aaPredicted RBP15.38■□□□□ 0.05
CALD1-206ENST00000424922 GCNAQ96QF7 691 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 PRMT1Q99873 361 aaKnown RBP15.38■□□□□ 0.05
CALD1-206ENST00000424922 CATSPERBQ9H7T0 1116 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 TMEM120BA0PK00 339 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 KLKB1P03952 638 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 PTPN2P17706 415 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 CORO1AP31146 461 aaKnown RBP15.37■□□□□ 0.05
CALD1-206ENST00000424922 BMP8BP34820 402 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 CCR2P41597 374 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 NRIP1P48552 1158 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 ITIH4Q14624 930 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 CCDC38Q502W7 563 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 STXBP5Q5T5C0 1151 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 FBXL22Q6P050 247 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 CHSY1Q86X52 802 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 CDKL3Q8IVW4 592 aaPredicted RBP15.37■□□□□ 0.05
CALD1-206ENST00000424922 PPIL6Q8IXY8 311 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 TFB1MQ8WVM0 346 aaKnown RBP15.37■□□□□ 0.05
CALD1-206ENST00000424922 WBP2Q969T9 261 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 ZFRQ96KR1 1074 aaKnown RBP15.37■□□□□ 0.05
CALD1-206ENST00000424922 QKIQ96PU8 341 aaKnown RBP eCLIP15.37■□□□□ 0.05
CALD1-206ENST00000424922 LMAN2LQ9H0V9 348 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 ACTR5Q9H9F9 607 aaPredicted RBP15.37■□□□□ 0.05
CALD1-206ENST00000424922 DNMT3BQ9UBC3 853 aaKnown RBP15.37■□□□□ 0.05
CALD1-206ENST00000424922 ACSL4O60488 711 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 OLFM2O95897 454 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 HNRNPA1P09651 372 aaKnown RBP eCLIP15.37■□□□□ 0.05
CALD1-206ENST00000424922 HOXA9P31269 272 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 SERPINB6P35237 376 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 SLC11A2P49281 568 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 SMAD3P84022 425 aaKnown RBP15.37■□□□□ 0.05
CALD1-206ENST00000424922 AP1B1Q10567 949 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 MTA1Q13330 715 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 PDK1Q15118 436 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 ZKSCAN8Q15776 578 aaPredicted RBP15.37■□□□□ 0.05
CALD1-206ENST00000424922 CCDC121Q6ZUS5 278 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 CCDC197Q8NCU1 140 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 CCNYQ8ND76 341 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 MAML1Q92585 1016 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 IGSF8Q969P0 613 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 CELF6Q96J87 481 aaKnown RBP15.37■□□□□ 0.05
CALD1-206ENST00000424922 PRDM12Q9H4Q4 367 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 NDFIP2Q9NV92 336 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 FETUBQ9UGM5 382 aa15.37■□□□□ 0.05
CALD1-206ENST00000424922 CFAP69A5D8W1 941 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 HACD1B0YJ81 288 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 XYLBO75191 536 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 CKMP06732 381 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 RHOP08100 348 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 TSHRP16473 764 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 TACR2P21452 398 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 RPL22P35268 128 aaKnown RBP15.36■□□□□ 0.05
CALD1-206ENST00000424922 LIG3P49916 1009 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 ZXDBP98169 803 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 PPARDQ03181 441 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 LACTB2Q53H82 288 aaPredicted RBP15.36■□□□□ 0.05
CALD1-206ENST00000424922 RFWD3Q6PCD5 774 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 CCDC91Q7Z6B0 441 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 LRRC34Q8IZ02 419 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 TTC16Q8NEE8 873 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 RNF217Q8TC41 542 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 TCEAL4Q96EI5 215 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 MYEOVQ96EZ4 313 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 RPRD1AQ96P16 312 aaPredicted RBP15.36■□□□□ 0.05
CALD1-206ENST00000424922 ZYG11BQ9C0D3 744 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 KLC2Q9H0B6 622 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 PPARGC1AQ9UBK2 798 aaKnown RBP15.36■□□□□ 0.05
CALD1-206ENST00000424922 CTNNAL1Q9UBT7 734 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 DPP7Q9UHL4 492 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 CPQQ9Y646 472 aa15.36■□□□□ 0.05
CALD1-206ENST00000424922 CHD5Q8TDI0 1954 aa15.35■□□□□ 0.05
CALD1-206ENST00000424922 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms