RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 C8orf33Q9H7E9 229 aaPredicted RBP16.1■□□□□ 0.17
DDX55-203ENST00000421670 FBRSL1Q9HCM7 1045 aaKnown RBP16.1■□□□□ 0.17
DDX55-203ENST00000421670 DONSONQ9NYP3 566 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 DTLQ9NZJ0 730 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 VPS28Q9UK41 221 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 FBXL21Q9UKT6 434 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 INTS6Q9UL03 887 aaKnown RBP16.1■□□□□ 0.17
DDX55-203ENST00000421670 EFR3BQ9Y2G0 817 aa16.1■□□□□ 0.17
DDX55-203ENST00000421670 SHISA7A6NL88 538 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 ZNF500O60304 480 aaPredicted RBP16.09■□□□□ 0.17
DDX55-203ENST00000421670 ZFXP17010 805 aaPredicted RBP16.09■□□□□ 0.17
DDX55-203ENST00000421670 TGM2P21980 687 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 GLDCP23378 1020 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 EIF2DP41214 584 aaKnown RBP16.09■□□□□ 0.17
DDX55-203ENST00000421670 NDST2P52849 883 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 PON2Q15165 354 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 PLEKHG6Q3KR16 790 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 PITRM1Q5JRX3 1037 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 AFMIDQ63HM1 303 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 TMEM215Q68D42 235 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 ARHGAP36Q6ZRI8 547 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 ZNF354CQ86Y25 554 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 LZTR1Q8N653 840 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.09■□□□□ 0.17
DDX55-203ENST00000421670 TERB1Q8NA31 727 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 LRRN4Q8WUT4 740 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 ARHGEF2Q92974 986 aaKnown RBP16.09■□□□□ 0.17
DDX55-203ENST00000421670 ALG14Q96F25 216 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 P2RY13Q9BPV8 354 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 FEM1AQ9BSK4 669 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 ATP13A1Q9HD20 1204 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 ARHGEF3Q9NR81 526 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 SLC27A6Q9Y2P4 619 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 OR51B4Q9Y5P0 310 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.09■□□□□ 0.17
DDX55-203ENST00000421670 APOC4-APOC2K7ER74 178 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 CES2O00748 559 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 KAT7O95251 611 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 APOC2P02655 101 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 PAPOLAP51003 745 aaKnown RBP16.09■□□□□ 0.17
DDX55-203ENST00000421670 GALK1P51570 392 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 PARP15Q460N3 678 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 IL31Q6EBC2 164 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 ADIPOR2Q86V24 386 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 UBALD2Q8IYN6 164 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 AHI1Q8N157 1196 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 RASGEF1CQ8N431 466 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 SPON2Q9BUD6 331 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 MAGEH1Q9H213 219 aa16.09■□□□□ 0.17
DDX55-203ENST00000421670 R3HDM2Q9Y2K5 976 aaKnown RBP16.09■□□□□ 0.17
DDX55-203ENST00000421670 KRBA1A5PL33 1030 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 ANTXRLA6NF34 631 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 PRRT4C9JH25 899 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 CBX4O00257 560 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 PGRMC1O00264 195 aaKnown RBP16.08■□□□□ 0.16
DDX55-203ENST00000421670 SNAP91O60641 907 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 GLULP15104 373 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 PRLRP16471 622 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 OXCT1P55809 520 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 YBEYP58557 167 aaPredicted RBP16.08■□□□□ 0.16
DDX55-203ENST00000421670 OTUD4Q01804 1114 aaKnown RBP16.08■□□□□ 0.16
DDX55-203ENST00000421670 SLC12A1Q13621 1099 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 LONRF2Q1L5Z9 754 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 ZNF783Q6ZMS7 281 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 B4GALNT4Q76KP1 1039 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 KIAA0907Q7Z7F0 614 aaPredicted RBP16.08■□□□□ 0.16
DDX55-203ENST00000421670 ATPAF2Q8N5M1 289 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 ACTL9Q8TC94 416 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 P3H4Q92791 437 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 EZH1Q92800 747 aaPredicted RBP16.08■□□□□ 0.16
DDX55-203ENST00000421670 OLFM3Q96PB7 478 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 PRDM16Q9HAZ2 1276 aa16.08■□□□□ 0.16
DDX55-203ENST00000421670 ARHGAP42A6NI28 874 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 TUBB4AP04350 444 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 APODP05090 189 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 GRIA2P42262 883 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 CTSOP43234 321 aaPredicted RBP16.07■□□□□ 0.16
DDX55-203ENST00000421670 GALNT2Q10471 571 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 SERINC3Q13530 473 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 SIX1Q15475 284 aaPredicted RBP16.07■□□□□ 0.16
DDX55-203ENST00000421670 LEKR1Q6ZMV7 388 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 CREG2Q8IUH2 290 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 SIX5Q8N196 739 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 SORCS1Q8WY21 1168 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 ATG4AQ8WYN0 398 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 FAM3CQ92520 227 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 MSANTD3Q96H12 275 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 ACE2Q9BYF1 805 aaPredicted RBP16.07■□□□□ 0.16
DDX55-203ENST00000421670 CIPCQ9C0C6 399 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 WNT16Q9UBV4 365 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 VPS51Q9UID3 782 aa16.07■□□□□ 0.16
DDX55-203ENST00000421670 NDRG2Q9UN36 371 aaKnown RBP16.07■□□□□ 0.16
DDX55-203ENST00000421670 TBC1D3BA6NDS4 549 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 J3KR12 359 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 URI1O94763 535 aaPredicted RBP16.06■□□□□ 0.16
DDX55-203ENST00000421670 EGFP01133 1207 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 ETFBP38117 255 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 GARSP41250 739 aaKnown RBP16.06■□□□□ 0.16
DDX55-203ENST00000421670 NR2C2P49116 596 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 PLK1P53350 603 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms