RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 DENND1BQ6P3S1 775 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 LRRC69Q6ZNQ3 347 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 DSG4Q86SJ6 1040 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 TMEM110Q86TL2 294 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 SPATS2Q86XZ4 545 aaKnown RBP17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 CCAR2Q8N163 923 aaKnown RBP17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 CACTIN-AS1Q8N1I8 211 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 KREMEN1Q96MU8 473 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 MED15Q96RN5 788 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 PRMT1Q99873 361 aaKnown RBP17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 THAP9Q9H5L6 903 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 SLC12A6Q9UHW9 1150 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 HOOK1Q9UJC3 728 aaKnown RBP17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 DMTF1Q9Y222 760 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 A0A1B0GVM2 712 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 TCAF2A6NFQ2 919 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 E5RJQ4 531 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 TK2O00142 265 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 RRP8O43159 456 aaKnown RBP17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 MED7O43513 233 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 PLRG1O43660 514 aaKnown RBP17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 RTN2O75298 545 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 SLC2A3P11169 496 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 KRT5P13647 590 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 PPP1R2P41236 205 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 METAP1P53582 386 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 TTC39BQ5VTQ0 682 aaPredicted RBP17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 FAM46CQ5VWP2 391 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 TRIM69Q86WT6 500 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 ZNF606Q8WXB4 792 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 OR8D1Q8WZ84 308 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 TIGD1Q96MW7 591 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 PPP1R9BQ96SB3 815 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 PRORYQ9H606 182 aa17.37■□□□□ 0.37
UPF3AP3-201ENST00000420996 GOLGA6L4A6NEF3 574 aa17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 ATP9BO43861 1147 aa17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 CD44P16070 742 aaKnown RBP17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 MAT2AP31153 395 aaKnown RBP17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 NUMBP49757 651 aa17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 PITX1P78337 314 aaPredicted RBP17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 STAT4Q14765 748 aa17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 RABGAP1LQ5R372 815 aa17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 CXorf57Q6NSI4 855 aaKnown RBP17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 TTI2Q6NXR4 508 aa17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 FOXR2Q6PJQ5 311 aa17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 SNIP1Q8TAD8 396 aaKnown RBP17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 RFFLQ8WZ73 363 aa17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 ALG14Q96F25 216 aa17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 SARDHQ9UL12 918 aa17.36■□□□□ 0.37
UPF3AP3-201ENST00000420996 SMG1Q96Q15 3661 aaKnown RBP17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 PRAMEF26H0Y7S4 382 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 ALOX15BO15296 676 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 LETM1O95202 739 aaPredicted RBP17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 ACP1P24666 158 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 CDK17Q00537 523 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 C19orf57Q0VDD7 668 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 KCNH2Q12809 1159 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 CNTN1Q12860 1018 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 PROX2Q3B8N5 592 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 ACCSLQ4AC99 568 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 SETMARQ53H47 684 aaPredicted RBP17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 AGBL4Q5VU57 503 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 ISM2Q6H9L7 571 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 FBXL22Q6P050 247 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 CIR1Q86X95 450 aaPredicted RBP17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 BAP1Q92560 729 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 FEM1AQ9BSK4 669 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 SLC25A13Q9UJS0 675 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 PPM1HQ9ULR3 514 aa17.35■□□□□ 0.37
UPF3AP3-201ENST00000420996 C1QTNF3-AMACRE9PGA6 284 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 MCF2LO15068 1137 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 ATXN7O15265 892 aaPredicted RBP17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 GLDCP23378 1020 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 CCR1P32246 355 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 E2F1Q01094 437 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 ZNF211Q13398 564 aaPredicted RBP17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 TAF5Q15542 800 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 DLG2Q15700 870 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 KLHL10Q6JEL2 608 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 TRIM59Q8IWR1 403 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 SLC39A7Q92504 469 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 FGF11Q92914 225 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 RNF34Q969K3 372 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 KLHDC7BQ96G42 594 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 RPRD1AQ96P16 312 aaPredicted RBP17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 INTS2Q9H0H0 1204 aaKnown RBP17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 FAM204AQ9H8W3 233 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 UBE2TQ9NPD8 197 aaPredicted RBP17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 MAN1B1Q9UKM7 699 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 CLCA2Q9UQC9 943 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 RAI2Q9Y5P3 530 aa17.34■□□□□ 0.37
UPF3AP3-201ENST00000420996 GCN1Q92616 2671 aaKnown RBP17.33■□□□□ 0.36
UPF3AP3-201ENST00000420996 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.33■□□□□ 0.36
UPF3AP3-201ENST00000420996 BICDL2A1A5D9 508 aa17.33■□□□□ 0.36
UPF3AP3-201ENST00000420996 THAP12O43422 761 aa17.33■□□□□ 0.36
UPF3AP3-201ENST00000420996 SIGLEC6O43699 453 aa17.33■□□□□ 0.36
UPF3AP3-201ENST00000420996 RNGTTO60942 597 aaKnown RBP17.33■□□□□ 0.36
UPF3AP3-201ENST00000420996 GNA14O95837 355 aa17.33■□□□□ 0.36
UPF3AP3-201ENST00000420996 AFPP02771 609 aaKnown RBP17.33■□□□□ 0.36
UPF3AP3-201ENST00000420996 PRB1P04280 392 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms