RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 SDR42E2A6NKP2 422 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 GOLGA8CPA6NN73 597 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 KRT37O76014 449 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 C1RP00736 705 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 SLC4A1P02730 911 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 GJA1P17302 382 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 OAS2P29728 719 aaKnown RBP7.57□□□□□ -1.2
BDNF-209ENST00000420794 MS4A13Q5J8X5 152 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 CCDC91Q7Z6B0 441 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 EFHBQ8N7U6 833 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 ING5Q8WYH8 240 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 SLCO2A1Q92959 643 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 CIPCQ9C0C6 399 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 RETREG1Q9H6L5 497 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 SCUBE2Q9NQ36 999 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 TDP1Q9NUW8 608 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 ARHGEF38Q9NXL2 777 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 CHMP2BQ9UQN3 213 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 ZFP37Q9Y6Q3 630 aaPredicted RBP7.57□□□□□ -1.2
BDNF-209ENST00000420794 KRT38O76015 456 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 ADH1CP00326 375 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 ATP5BP06576 529 aaKnown RBP7.57□□□□□ -1.2
BDNF-209ENST00000420794 ETS1P14921 441 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 FSHRP23945 695 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 WEE1P30291 646 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 HSPA9P38646 679 aaKnown RBP7.57□□□□□ -1.2
BDNF-209ENST00000420794 SCNN1BP51168 640 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 PRAMEP78395 509 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 PAFAH1B3Q15102 231 aaKnown RBP7.57□□□□□ -1.2
BDNF-209ENST00000420794 TEX44Q53QW1 395 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 C9orf50Q5SZB4 431 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 NCBP2-AS2Q69YL0 99 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 LRIG3Q6UXM1 1119 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 C3orf62Q6ZUJ4 267 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 ARFGAP1Q8N6T3 406 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 PDCD7Q8N8D1 485 aaKnown RBP7.57□□□□□ -1.2
BDNF-209ENST00000420794 KHSRPQ92945 711 aaKnown RBP eCLIP7.57□□□□□ -1.2
BDNF-209ENST00000420794 STAMBPL1Q96FJ0 436 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 ASIC4Q96FT7 647 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 CYP2S1Q96SQ9 504 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 PRKD2Q9BZL6 878 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 ETNK1Q9HBU6 452 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 TMPRSS4Q9NRS4 437 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 FAM153AQ9UHL3 310 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 LCHNA4D1U4 455 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 C5orf60A6NFR6 353 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 HIDE1A8MVS5 230 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 H3BNC9 293 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 RFPL2O75678 378 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 PMLP29590 882 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 PAPOLAP51003 745 aaKnown RBP7.57□□□□□ -1.2
BDNF-209ENST00000420794 ERVK-21P61565 698 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 GNA12Q03113 381 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 CDH17Q12864 832 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 KLF1Q13351 362 aaPredicted RBP7.57□□□□□ -1.2
BDNF-209ENST00000420794 CCDC38Q502W7 563 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 ZCCHC9Q8N567 271 aaKnown RBP7.57□□□□□ -1.2
BDNF-209ENST00000420794 MYRFLQ96LU7 910 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 SMC6Q96SB8 1091 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 PKMYT1Q99640 499 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 WDR6Q9NNW5 1121 aaKnown RBP7.57□□□□□ -1.2
BDNF-209ENST00000420794 DYRK4Q9NR20 520 aa7.57□□□□□ -1.2
BDNF-209ENST00000420794 NFATC1O95644 943 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 LATS1O95835 1130 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 MYOGP15173 224 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 EPCAMP16422 314 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 POLR2EP19388 210 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 TMED2Q15363 201 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 TEAD2Q15562 447 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 TRNP1Q6NT89 227 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 SLC25A41Q8N5S1 370 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 NT5C3BQ969T7 300 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 LRRC39Q96DD0 335 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 NSUN3Q9H649 340 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 ZFATQ9P243 1243 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 TBK1Q9UHD2 729 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 IRAK3Q9Y616 596 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 MAGEB16A2A368 324 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 MATN3O15232 486 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 SH3BP5O60239 455 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 GCATO75600 419 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 MT-ND3P03897 115 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 CES1P23141 567 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 PTGIRP43119 386 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 HNRNPDQ14103 355 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 SLC29A2Q14542 456 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 KCTD16Q68DU8 428 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 SDE2Q6IQ49 451 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 TDHQ8IZJ6 230 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 HS6ST3Q8IZP7 471 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 CELF5Q8N6W0 485 aaKnown RBP7.56□□□□□ -1.2
BDNF-209ENST00000420794 PQLC3Q8N755 202 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 PPM1NQ8N819 430 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 OR6P1Q8NGX9 317 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 OLIG1Q8TAK6 271 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 GDPD5Q8WTR4 605 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 ART4Q93070 314 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 HDAC11Q96DB2 347 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 ADGRE3Q9BY15 652 aa7.56□□□□□ -1.2
BDNF-209ENST00000420794 ROPN1BQ9BZX4 212 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms