RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 MAD1L1Q9Y6D9 718 aa9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 MTCL1Q9Y4B5 1905 aaKnown RBP9.26□□□□□ -0.93
LINCMD1-201ENST00000418518 ANKRD36A6QL64 1941 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 ALPK3Q96L96 1907 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 HMX2A2RU54 273 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 ARHGAP42A6NI28 874 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 SLC38A8A6NNN8 435 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 RFPL1O75677 317 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 USP1O94782 785 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 ABLIM3O94929 683 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 PEX11BO96011 259 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 JCHAINP01591 159 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 VIMP08670 466 aaKnown RBP9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 CCNB1P14635 433 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 GBP2P32456 591 aaPredicted RBP9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 ADRA1AP35348 466 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 TUBP50607 506 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 CCL23P55773 120 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 PPARDQ03181 441 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 MGAT5Q09328 741 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 IKBKEQ14164 716 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 PSMD5Q16401 504 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 DBN1Q16643 649 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 LACTB2Q53H82 288 aaPredicted RBP9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 RASIP1Q5U651 963 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 TPGS2Q68CL5 300 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 NAPEPLDQ6IQ20 393 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 CGB2Q6NT52 195 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 RWDD4Q6NW29 188 aaKnown RBP9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 KLHDC10Q6PID8 442 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 LVRNQ6Q4G3 990 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 TAS1R1Q7RTX1 841 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 LINC00523Q86TU6 105 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 ANKS4BQ8N8V4 417 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 STKLD1Q8NE28 680 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 PDZD8Q8NEN9 1154 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 GDAP1Q8TB36 358 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 ACMSDQ8TDX5 336 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 DEPDC1BQ8WUY9 529 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 ZNF419Q96HQ0 510 aaPredicted RBP9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 CELF6Q96J87 481 aaKnown RBP9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 ZNF333Q96JL9 665 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 SIK2Q9H0K1 926 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 GLOD4Q9HC38 313 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 FGFR1OP2Q9NVK5 253 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 BFARQ9NZS9 450 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 MARCH2Q9P0N8 246 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 PRKAG3Q9UGI9 489 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 AFF4Q9UHB7 1163 aaKnown RBP9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 VANGL2Q9ULK5 521 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 SOX13Q9UN79 622 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 AAR2Q9Y312 384 aaKnown RBP9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 STARD13Q9Y3M8 1113 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 CEP350Q5VT06 3117 aa9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 KIAA0100Q14667 2235 aaKnown RBP9.25□□□□□ -0.93
LINCMD1-201ENST00000418518 ZCWPW2A0A1B0GU75 182 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 GOLGA6L7A0A1B0GV03 622 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 ABHD14A-ACY1A0A1B0GW23 586 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 MAGEB16A2A368 324 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 NT5C1B-RDH14C9J2C7 533 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 ADAM12O43184 909 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 UGT1A9O60656 530 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 EDF1O60869 148 aaKnown RBP9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 EFCAB14O75071 495 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 SOAT2O75908 522 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 PIAS1O75925 651 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 ANXA9O76027 345 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 KIAA0754O94854 1291 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 SOD2P04179 222 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 POLBP06746 335 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 SRGAP2BP0DMP2 458 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 PBX3P40426 434 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 MAGEA12P43365 314 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 MAPKAPK2P49137 400 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 TUFMP49411 452 aaKnown RBP9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 ALDH7A1P49419 539 aaKnown RBP9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 ATN1P54259 1190 aaPredicted RBP9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 GEMP55040 296 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 SESN2P58004 480 aaPredicted RBP9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 DSG1Q02413 1049 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 EFEMP1Q12805 493 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 CDH17Q12864 832 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 DUSP4Q13115 394 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 HNRNPDQ14103 355 aaKnown RBP9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 PRPSAP1Q14558 356 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 ANO4Q32M45 955 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 MGAT5BQ3V5L5 792 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 STXBP5Q5T5C0 1151 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 HHATQ5VTY9 493 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 PRSS55Q6UWB4 352 aaPredicted RBP9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 ARHGAP36Q6ZRI8 547 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 SPATA21Q7Z572 469 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 CTAGE3PQ8IX95 158 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 CMTR2Q8IYT2 770 aaKnown RBP9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 SLC39A11Q8N1S5 342 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 TEX26Q8N6G2 289 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 OR52K1Q8NGK4 314 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 TCP10LQ8TDR4 215 aa9.24□□□□□ -0.93
LINCMD1-201ENST00000418518 PTCD2Q8WV60 388 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms