RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 NAPEPLDQ6IQ20 393 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 FBXL22Q6P050 247 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 DEPDC1BQ8WUY9 529 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 TTC17Q96AE7 1141 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 PLD4Q96BZ4 506 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 FCRL5Q96RD9 977 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 NACA2Q9H009 215 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 TRABDQ9H4I3 376 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 RXFP1Q9HBX9 757 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 PPANQ9NQ55 473 aaKnown RBP17.16■□□□□ 0.34
SSBP3-205ENST00000417664 BFARQ9NZS9 450 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 MAGEB16A2A368 324 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 ERICH4A6NGS2 130 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 FAM47DPA6NHR8 397 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 FAM155BO75949 473 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 ACRP10323 421 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 NFKB1P19838 968 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 NPY2RP49146 381 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 SLC11A2P49281 568 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 PAPOLAP51003 745 aaKnown RBP17.16■□□□□ 0.34
SSBP3-205ENST00000417664 LBX1P52954 281 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 YBEYP58557 167 aaPredicted RBP17.16■□□□□ 0.34
SSBP3-205ENST00000417664 C1QTNF8P60827 252 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 HTRA4P83105 476 aaPredicted RBP17.16■□□□□ 0.34
SSBP3-205ENST00000417664 PLD1Q13393 1074 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 NAB1Q13506 487 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 HNRNPDQ14103 355 aaKnown RBP17.16■□□□□ 0.34
SSBP3-205ENST00000417664 GORASP1Q9BQQ3 440 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 CASS4Q9NQ75 786 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 MOCS1Q9NZB8 636 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 IPO11Q9UI26 975 aaKnown RBP17.16■□□□□ 0.34
SSBP3-205ENST00000417664 DOCK4Q8N1I0 1966 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 FAM159BA6NKW6 160 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 PRRG1O14668 218 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 GJB5O95377 273 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 FGBP02675 491 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 RENBPP51606 427 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 EPHB3P54753 998 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 FRG1Q14331 258 aaKnown RBP17.15■□□□□ 0.34
SSBP3-205ENST00000417664 EFTUD2Q15029 972 aaKnown RBP eCLIP17.15■□□□□ 0.344e-7■■■■■ 32.3
SSBP3-205ENST00000417664 PARP15Q460N3 678 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 FAM182AQ5T1J6 154 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 ARMC3Q5W041 872 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 RAP1GAP2Q684P5 730 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 CASC4Q6P4E1 433 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 OTOP2Q7RTS6 562 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 TMCO2Q7Z6W1 182 aaPredicted RBP17.15■□□□□ 0.34
SSBP3-205ENST00000417664 ITIH5Q86UX2 942 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 CHSY1Q86X52 802 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 MPP5Q8N3R9 675 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 CNTD1Q8N815 330 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 ARNTL2Q8WYA1 636 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 CDKL2Q92772 493 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 CHMP6Q96FZ7 201 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 RPRD1AQ96P16 312 aaPredicted RBP17.15■□□□□ 0.34
SSBP3-205ENST00000417664 CCT8L2Q96SF2 557 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 PLAC1Q9HBJ0 212 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 NDFIP2Q9NV92 336 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 SAMD15Q9P1V8 674 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 PRKAG2Q9UGJ0 569 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 ASB3Q9Y575 518 aa17.15■□□□□ 0.34
SSBP3-205ENST00000417664 F5H5T6 163 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 ACSL4O60488 711 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 LILRB3O75022 631 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 KRT37O76014 449 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 NEBLO76041 1014 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 POLBP06746 335 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 CTSAP10619 480 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 CREB1P16220 341 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 TACR2P21452 398 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 CNTFP26441 200 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 MGAT1P26572 445 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 SERPINB9P50453 376 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 GEMP55040 296 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 SESN2P58004 480 aaPredicted RBP17.14■□□□□ 0.33
SSBP3-205ENST00000417664 TNK2Q07912 1038 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 TTC39BQ5VTQ0 682 aaPredicted RBP17.14■□□□□ 0.33
SSBP3-205ENST00000417664 FIBCD1Q8N539 461 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 MZB1Q8WU39 189 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 DYDC1Q8WWB3 177 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 CLP1Q92989 425 aaKnown RBP17.14■□□□□ 0.33
SSBP3-205ENST00000417664 PSMG2Q969U7 264 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 MTBPQ96DY7 904 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 NOL6Q9H6R4 1146 aaKnown RBP17.14■□□□□ 0.33
SSBP3-205ENST00000417664 GLOD4Q9HC38 313 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 INSL6Q9Y581 213 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 SHROOM3Q8TF72 1996 aa17.14■□□□□ 0.33
SSBP3-205ENST00000417664 COCHO43405 550 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 FGF18O76093 207 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 HMBSP08397 361 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 CDH17Q12864 832 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 PABPC1LQ4VXU2 614 aaKnown RBP17.13■□□□□ 0.33
SSBP3-205ENST00000417664 SPANXN3Q5MJ09 141 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 ARHGAP36Q6ZRI8 547 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 PRPF39Q86UA1 669 aaKnown RBP17.13■□□□□ 0.33
SSBP3-205ENST00000417664 CCDC117Q8IWD4 279 aaPredicted RBP17.13■□□□□ 0.33
SSBP3-205ENST00000417664 CTAGE3PQ8IX95 158 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 DNAAF3Q8N9W5 541 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 NSMCE1Q8WV22 266 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 MRRFQ96E11 262 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms