RNA–Protein interactions for RNA: ENST00000417243.5

TRAPPC12-206, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 1,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-206ENST00000417243 SLC10A2Q12908 348 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 XRCC4Q13426 336 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 SERINC3Q13530 473 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 POLD3Q15054 466 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 PDK1Q15118 436 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 LLGL1Q15334 1064 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 CYP1B1Q16678 543 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 LONRF2Q1L5Z9 754 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 PLEKHG6Q3KR16 790 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 CCDC181Q5TID7 509 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 RALGPS2Q86X27 583 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 AHI1Q8N157 1196 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 SLC35B2Q8TB61 432 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 ACTL9Q8TC94 416 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 ZNF592Q92610 1267 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 FATE1Q969F0 183 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 MS4A14Q96JA4 679 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 TSGA13Q96PP4 275 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 FEM1AQ9BSK4 669 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 ACE2Q9BYF1 805 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 SLC39A8Q9C0K1 460 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 HOMER3Q9NSC5 361 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 ABCB8Q9NUT2 735 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 DNAJC17Q9NVM6 304 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 GGA2Q9UJY4 613 aa12.85□□□□□ -0.35
TRAPPC12-206ENST00000417243 A0A0D9SEW6 157 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 HACD1B0YJ81 288 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 SPECC1L-ADORA2AF8WAN1 911 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 PPP1R12AO14974 1030 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 MCF2LO15068 1137 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 NARSO43776 548 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 URI1O94763 535 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 CD70P32970 193 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 CSKP41240 450 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 PAFAH1B1P43034 410 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 CKAP4Q07065 602 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 PPIDQ08752 370 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 EIF4HQ15056 248 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 CCNG2Q16589 344 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 FUT11Q495W5 492 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 PITRM1Q5JRX3 1037 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 RNF219Q5W0B1 726 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 ASTLQ6HA08 431 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 GRAMD4Q6IC98 578 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 NPNTQ6UXI9 565 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 ATPAF2Q8N5M1 289 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 PRELID2Q8N945 189 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 TERB1Q8NA31 727 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 NKD2Q969F2 451 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 EXOC4Q96A65 974 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 ACDQ96AP0 544 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 HMCESQ96FZ2 354 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 CELF6Q96J87 481 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 CAPZA3Q96KX2 299 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 QKIQ96PU8 341 aaKnown RBP eCLIP12.84□□□□□ -0.358e-8■■■■□ 26.5
TRAPPC12-206ENST00000417243 C2orf49Q9BVC5 232 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 L2HGDHQ9H9P8 463 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 DEC1Q9P2X7 70 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 INTS6Q9UL03 887 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 R3HDM2Q9Y2K5 976 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 HEY1Q9Y5J3 304 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 PIAS3Q9Y6X2 628 aa12.84□□□□□ -0.35
TRAPPC12-206ENST00000417243 A0A0A0MRY4 1105 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 GOLGA6L10A0A0M3HER8 536 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 ZSCAN5CA6NGD5 496 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 CCDC188H7C350 402 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 PDE2AO00408 941 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 ZMPSTE24O75844 475 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 MZF1P28698 734 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 VASPP50552 380 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 PAPOLAP51003 745 aaKnown RBP12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 SULT2A1Q06520 285 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 PRKD1Q15139 912 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 OASLQ15646 514 aaKnown RBP12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 TJAP1Q5JTD0 557 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 RNF135Q8IUD6 432 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 CDKL3Q8IVW4 592 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 TP53INP2Q8IXH6 220 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 UBALD2Q8IYN6 164 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 NAT16Q8N8M0 369 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 OR7D4Q8NG98 312 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 TTC17Q96AE7 1141 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 HAUS1Q96CS2 278 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 ZNF599Q96NL3 588 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 PNKPQ96T60 521 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 MUC3BQ9H195 1237 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 PDFQ9HBH1 243 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 ATP13A1Q9HD20 1204 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 HEBP1Q9NRV9 189 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 SMARCAL1Q9NZC9 954 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 SAE1Q9UBE0 346 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 VPS28Q9UK41 221 aa12.83□□□□□ -0.36
TRAPPC12-206ENST00000417243 NCOR1O75376 2440 aa12.82□□□□□ -0.36
TRAPPC12-206ENST00000417243 BCLAF3A2AJT9 711 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-206ENST00000417243 CFAP69A5D8W1 941 aa12.82□□□□□ -0.36
TRAPPC12-206ENST00000417243 SHISA7A6NL88 538 aa12.82□□□□□ -0.36
TRAPPC12-206ENST00000417243 DFFAO00273 331 aa12.82□□□□□ -0.36
TRAPPC12-206ENST00000417243 KRIT1O00522 736 aa12.82□□□□□ -0.36
TRAPPC12-206ENST00000417243 KDELR3O43731 214 aa12.82□□□□□ -0.36
TRAPPC12-206ENST00000417243 LIASO43766 372 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms