RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 NDC80O14777 642 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 CHADO15335 359 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 TTI1O43156 1089 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 RAD51CO43502 376 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 HEXIM1O94992 359 aaKnown RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 KRT14P02533 472 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 CYP17A1P05093 508 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 RHOXF2BP0C7M4 288 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 TYRP14679 529 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 CCNCP24863 283 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 HOXD9P28356 352 aaPredicted RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 RBL1P28749 1068 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 CSKP41240 450 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 PAPOLAP51003 745 aaKnown RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 PPIDQ08752 370 aaKnown RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 FCHO2Q0JRZ9 810 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 SLC10A2Q12908 348 aaPredicted RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 SLC12A1Q13621 1099 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 OASLQ15646 514 aaKnown RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 SMAD2Q15796 467 aaKnown RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 AAK1Q2M2I8 961 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 EML3Q32P44 896 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 PREPLQ4J6C6 727 aaPredicted RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 FYB2Q5VWT5 728 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 TRIM68Q6AZZ1 485 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 ITPRIPL1Q6GPH6 555 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 TTC27Q6P3X3 843 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 POTEHQ6S545 545 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 PARM1Q6UWI2 310 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 C4orf22Q6V702 233 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 ARHGEF18Q6ZSZ5 1173 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 TMEM25Q86YD3 366 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 JAMLQ86YT9 394 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 ARHGAP12Q8IWW6 846 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 ZDHHC14Q8IZN3 488 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 ALLCQ8N6M5 410 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 NOA1Q8NC60 698 aaKnown RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 ST13P5Q8NFI4 369 aaPredicted RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 OR7D4Q8NG98 312 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 MAFAQ8NHW3 353 aaPredicted RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 FIBINQ8TAL6 211 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 HTR3CQ8WXA8 447 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 FGF14Q92915 247 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 ARHGEF2Q92974 986 aaKnown RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 NXPE3Q969Y0 559 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 EXOC4Q96A65 974 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 LRRC45Q96CN5 670 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 HMCESQ96FZ2 354 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 ZFYVE19Q96K21 471 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 VAT1Q99536 393 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 RHOXF2Q9BQY4 288 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 TMEM121Q9BTD3 319 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 LRRC1Q9BTT6 524 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 SLC2A11Q9BYW1 496 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 LINC00597Q9H2U6 94 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 EBF3Q9H4W6 596 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 ECT2Q9H8V3 914 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 NDFIP2Q9NV92 336 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 KLHL8Q9P2G9 620 aaPredicted RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 ASIC3Q9UHC3 531 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 IPO11Q9UI26 975 aaKnown RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 VPS28Q9UK41 221 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 TBC1D30Q9Y2I9 924 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 NUMBLQ9Y6R0 609 aa8.6□□□□□ -1.03
RBM39-208ENST00000416108 TCF20Q9UGU0 1960 aaKnown RBP8.6□□□□□ -1.03
RBM39-208ENST00000416108 COL4A3Q01955 1670 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 ATG2BQ96BY7 2078 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 ZSCAN5CA6NGD5 496 aaPredicted RBP8.59□□□□□ -1.03
RBM39-208ENST00000416108 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.59□□□□□ -1.03
RBM39-208ENST00000416108 C2CD4DB7Z1M9 353 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 RNF103O00237 685 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 CBX4O00257 560 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 GFRA2O00451 464 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 HOXC11O43248 304 aaPredicted RBP8.59□□□□□ -1.03
RBM39-208ENST00000416108 KDELR3O43731 214 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 PENKP01210 267 aaPredicted RBP8.59□□□□□ -1.03
RBM39-208ENST00000416108 ARSAP15289 507 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 MCM3P25205 808 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 DGKGP49619 791 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 VPS41P49754 854 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 GEMIN4P57678 1058 aaKnown RBP8.59□□□□□ -1.03
RBM39-208ENST00000416108 IL10RBQ08334 325 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 LMAN2Q12907 356 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 HTR4Q13639 388 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 RUNX3Q13761 415 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 PTK6Q13882 451 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 DMC1Q14565 340 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 ZNF235Q14590 738 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 PRKD1Q15139 912 aaPredicted RBP8.59□□□□□ -1.03
RBM39-208ENST00000416108 ITPRIPL2Q3MIP1 535 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 AFMIDQ63HM1 303 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 CXorf57Q6NSI4 855 aaKnown RBP8.59□□□□□ -1.03
RBM39-208ENST00000416108 RETSATQ6NUM9 610 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 RHBDF2Q6PJF5 856 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 NUDT18Q6ZVK8 323 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 B4GALNT4Q76KP1 1039 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 ADGRG2Q8IZP9 1017 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 DCAF4L2Q8NA75 395 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 BBOF1Q8ND07 529 aa8.59□□□□□ -1.03
RBM39-208ENST00000416108 WFIKKN2Q8TEU8 576 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms