RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 KCNK12Q9HB15 430 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 TCF7L1Q9HCS4 588 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 TMEM30AQ9NV96 361 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 RAB20Q9NX57 234 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 GULP1Q9UBP9 304 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 RAPGEFL1Q9UHV5 662 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 RWDD2AQ9UIY3 292 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 CDH9Q9ULB4 789 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 CDH7Q9ULB5 785 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 CA14Q9ULX7 337 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 SORCS3Q9UPU3 1222 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 ANKRD6Q9Y2G4 727 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 SPO11Q9Y5K1 396 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 NUMBLQ9Y6R0 609 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 NCANO14594 1321 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 C22orf46C9J442 243 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 F8VP50 259 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 DVL2O14641 736 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 STX10O60499 249 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 TACC1O75410 805 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 TADA3O75528 432 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 PAPLNO95428 1278 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 POU2F2P09086 479 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 PF4V1P10720 104 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 P4HA1P13674 534 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 ALADP13716 330 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 HMGA1P17096 107 aaKnown RBP5.15□□□□□ -1.59
VPS41-205ENST00000414632 ANXA13P27216 316 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 PPP1R2P41236 205 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 VIPR2P41587 438 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 RECQLP46063 649 aaPredicted RBP5.15□□□□□ -1.59
VPS41-205ENST00000414632 MTIF2P46199 727 aaKnown RBP5.15□□□□□ -1.59
VPS41-205ENST00000414632 TUFMP49411 452 aaKnown RBP5.15□□□□□ -1.59
VPS41-205ENST00000414632 IRF9Q00978 393 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 TDGQ13569 410 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 VEPH1Q14D04 833 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 FAM78AQ5JUQ0 283 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 GPR158Q5T848 1215 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 TXNDC8Q6A555 127 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 TANGO2Q6ICL3 276 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 PPP4R4Q6NUP7 873 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 CAVIN1Q6NZI2 390 aaKnown RBP5.15□□□□□ -1.59
VPS41-205ENST00000414632 FAM171BQ6P995 826 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 CYP26C1Q6V0L0 522 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 C4orf50Q6ZRC1 276 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 C11orf57Q6ZUT1 292 aaPredicted RBP5.15□□□□□ -1.59
VPS41-205ENST00000414632 GAREM2Q75VX8 874 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 RRAGAQ7L523 313 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 FRMD5Q7Z6J6 570 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 ITIH5Q86UX2 942 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 IRF2BP1Q8IU81 584 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 ARHGEF19Q8IW93 802 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 CMIPQ8IY22 773 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 PLD6Q8N2A8 252 aaKnown RBP5.15□□□□□ -1.59
VPS41-205ENST00000414632 CPA6Q8N4T0 437 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 KIAA1958Q8N8K9 716 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 MLKLQ8NB16 471 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 SLC2A14Q8TDB8 520 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 C2orf15Q8WU43 125 aaKnown RBP5.15□□□□□ -1.59
VPS41-205ENST00000414632 EDAQ92838 391 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 KAT5Q92993 513 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 PSMG2Q969U7 264 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 RSPRY1Q96DX4 576 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 KCNK16Q96T55 309 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 ELF4Q99607 663 aaPredicted RBP5.15□□□□□ -1.59
VPS41-205ENST00000414632 CRACR2AQ9BSW2 395 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 GTPBP4Q9BZE4 634 aaKnown RBP5.15□□□□□ -1.59
VPS41-205ENST00000414632 ELOVL4Q9GZR5 314 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 TRPC7Q9HCX4 862 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 MKS1Q9NXB0 559 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS41-205ENST00000414632 MARCH2Q9P0N8 246 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 EPS15L1Q9UBC2 864 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 ADGRE2Q9UHX3 823 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 MAFFQ9ULX9 164 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 ZNF281Q9Y2X9 895 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 SNX11Q9Y5W9 270 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 MRFAP1Q9Y605 127 aa5.15□□□□□ -1.59
VPS41-205ENST00000414632 MYOFQ9NZM1 2061 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 KIAA1549LQ6ZVL6 1849 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 FAM170AA1A519 330 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 TMEM221A6NGB7 291 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 VSTM5A8MXK1 200 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 M0R296 226 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 PES1O00541 588 aaKnown RBP5.14□□□□□ -1.59
VPS41-205ENST00000414632 ZNF197O14709 1029 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 PCDHGA12O60330 932 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 BEST1O76090 585 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 PRAMEF12O95522 483 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 MBD3O95983 291 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 AFPP02771 609 aaKnown RBP5.14□□□□□ -1.59
VPS41-205ENST00000414632 FUCA1P04066 466 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 CCDC192P0DO97 292 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 FCARP24071 287 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 FPR2P25090 351 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 GTF2H1P32780 548 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 LSP1P33241 339 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 GATA4P43694 442 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 EPHA5P54756 1037 aa5.14□□□□□ -1.59
VPS41-205ENST00000414632 MAP3K7CLP57077 242 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms