RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 CCNYL3P0C7X3 344 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 SP140Q13342 867 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 GRM4Q14833 912 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 FNBP1LQ5T0N5 605 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 EXOC3L1Q86VI1 746 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 SETD9Q8NE22 299 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 NAT14Q8WUY8 206 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 UGT2B28Q9BY64 529 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 NIF3L1Q9GZT8 377 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 ABCB9Q9NP78 766 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 ARL15Q9NXU5 204 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 CYB5D1Q6P9G0 228 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 COLGALT1Q8NBJ5 622 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 MTMR12Q9C0I1 747 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 VANGL2Q9ULK5 521 aa12.53□□□□□ -0.4
SMU1-201ENST00000397149 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.53□□□□□ -0.4
SMU1-201ENST00000397149 PDXKO00764 312 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 NOS2P35228 1153 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 FCGRTP55899 365 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 PRMT9Q6P2P2 845 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 DENND6BQ8NEG7 585 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 TMEM168Q9H0V1 697 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 INTS10Q9NVR2 710 aaKnown RBP12.52□□□□□ -0.4
SMU1-201ENST00000397149 IKZF2Q9UKS7 526 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 RPH3AQ9Y2J0 694 aaPredicted RBP12.52□□□□□ -0.4
SMU1-201ENST00000397149 PCDHB2Q9Y5E7 798 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 SYCP2Q9BX26 1530 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 ZSCAN5CA6NGD5 496 aaPredicted RBP12.52□□□□□ -0.4
SMU1-201ENST00000397149 TEX46H3BTG2 121 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 ANXA6P08133 673 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 CYP2A13Q16696 494 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 CHRDL2Q6WN34 429 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 ZNF276Q8N554 614 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 ZSCAN5AQ9BUG6 496 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 MARCH7Q9H992 704 aa12.52□□□□□ -0.4
SMU1-201ENST00000397149 ZSCAN5BA6NJL1 495 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 PLOD2O00469 737 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 RASA1P20936 1047 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 RASGEF1AQ8N9B8 481 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 OR6Y1Q8NGX8 325 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 TUT1Q9H6E5 874 aaKnown RBP12.52□□□□□ -0.41
SMU1-201ENST00000397149 KLQ9UEF7 1012 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 IKZF3Q9UKT9 509 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 FOXN3O00409 490 aaPredicted RBP12.52□□□□□ -0.41
SMU1-201ENST00000397149 GPR182O15218 404 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 PLIN3O60664 434 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 ERAL1O75616 437 aaKnown RBP12.52□□□□□ -0.41
SMU1-201ENST00000397149 PKNOX1P55347 436 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 R3HDM1Q15032 1099 aaKnown RBP12.52□□□□□ -0.41
SMU1-201ENST00000397149 TBC1D25Q3MII6 688 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 PDCD4Q53EL6 469 aaKnown RBP12.52□□□□□ -0.41
SMU1-201ENST00000397149 ANGEL2Q5VTE6 544 aaKnown RBP12.52□□□□□ -0.41
SMU1-201ENST00000397149 FAM91A1Q658Y4 838 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 ERP44Q9BS26 406 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 RBAK-RBAKDNI3L0D1 243 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 ETS1P14921 441 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 S100A2P29034 98 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 CCR1P32246 355 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 GRK5P34947 590 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 HLFQ16534 295 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 KYQ8NBH2 561 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 ACTRT2Q8TDY3 377 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 SLC38A2Q96QD8 506 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 BTBD7Q9P203 1132 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 DHRS7Q9Y394 339 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 PMF1-BGLAPU3KQ54 211 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 GMFBP60983 142 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 BNIP2Q12982 314 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 SQLEQ14534 574 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 CWF19L1Q69YN2 538 aaKnown RBP12.52□□□□□ -0.41
SMU1-201ENST00000397149 ARHGEF19Q8IW93 802 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 TSEN15Q8WW01 171 aaKnown RBP12.52□□□□□ -0.41
SMU1-201ENST00000397149 KAT2AQ92830 837 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 ZCCHC2Q9C0B9 1178 aaKnown RBP12.52□□□□□ -0.41
SMU1-201ENST00000397149 TOR3AQ9H497 397 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 ATP13A1Q9HD20 1204 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 NUDT5Q9UKK9 219 aa12.52□□□□□ -0.41
SMU1-201ENST00000397149 RBMX2Q9Y388 322 aaKnown RBP12.52□□□□□ -0.41
SMU1-201ENST00000397149 OAS3Q9Y6K5 1087 aaKnown RBP12.52□□□□□ -0.41
SMU1-201ENST00000397149 USP11P51784 963 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 MAD2L1Q13257 205 aaPredicted RBP12.51□□□□□ -0.41
SMU1-201ENST00000397149 TCEAL6Q6IPX3 200 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 DEF8Q6ZN54 512 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 SLC22A9Q8IVM8 553 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 NRSN1Q8IZ57 195 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 GPRC5AQ8NFJ5 357 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 ROPN1BQ9BZX4 212 aaPredicted RBP12.51□□□□□ -0.41
SMU1-201ENST00000397149 ROPN1Q9HAT0 212 aaPredicted RBP12.51□□□□□ -0.41
SMU1-201ENST00000397149 SEMA4BQ9NPR2 832 aaPredicted RBP12.51□□□□□ -0.41
SMU1-201ENST00000397149 KCTD8Q6ZWB6 473 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 RIBC1Q8N443 379 aaPredicted RBP12.51□□□□□ -0.41
SMU1-201ENST00000397149 DHRSXQ8N5I4 330 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 ADAM32Q8TC27 787 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 POMKQ9H5K3 350 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 PLGRKTQ9HBL7 147 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 MCCC2Q9HCC0 563 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 DRG1Q9Y295 367 aaKnown RBP12.51□□□□□ -0.41
SMU1-201ENST00000397149 MYRFQ9Y2G1 1151 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 DAGLAQ9Y4D2 1042 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 RIN1Q13671 783 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms