RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 ZNF534Q76KX8 674 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 TLK2Q86UE8 772 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 OSTM1Q86WC4 334 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 ENDOVQ8N8Q3 282 aaKnown RBP9.5□□□□□ -0.89
NDE1-201ENST00000396354 SLC35F5Q8WV83 523 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 ZFP42Q96MM3 310 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 C20orf96Q9NUD7 363 aaPredicted RBP9.5□□□□□ -0.89
NDE1-201ENST00000396354 KCNK4Q9NYG8 393 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 TSR3Q9UJK0 312 aaKnown RBP9.5□□□□□ -0.89
NDE1-201ENST00000396354 ADAMTS6Q9UKP5 1117 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 SOX13Q9UN79 622 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 SLC45A1Q9Y2W3 748 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 ZNF236Q9UL36 1845 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 MOCS2O96007 188 aaPredicted RBP9.5□□□□□ -0.89
NDE1-201ENST00000396354 CYP2C9P11712 490 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 POU6F1Q14863 301 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 PCSK7Q16549 785 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 SLC27A1Q6PCB7 646 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 NAPRTQ6XQN6 538 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 MAPK15Q8TD08 544 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 SNX25Q9H3E2 840 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 COG4Q9H9E3 785 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 IL1RL2Q9HB29 575 aa9.5□□□□□ -0.89
NDE1-201ENST00000396354 UNC80Q8N2C7 3258 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 NEMP2A6NFY4 417 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 AOC2O75106 756 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 TM7SF2O76062 418 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 DHRS4L1P0CG22 281 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 TGM2P21980 687 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 L1CAMP32004 1257 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 NAGLUP54802 743 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 CTBP1Q13363 440 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 SNX17Q15036 470 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 NRF1Q16656 503 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.49□□□□□ -0.89
NDE1-201ENST00000396354 KIAA0319Q5VV43 1072 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 MAVSQ7Z434 540 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 SATL1Q86VE3 508 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 ZNF410Q86VK4 478 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 SNX32Q86XE0 403 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 CDKL3Q8IVW4 592 aaPredicted RBP9.49□□□□□ -0.89
NDE1-201ENST00000396354 PLPP6Q8IY26 295 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 RYBPQ8N488 228 aaPredicted RBP9.49□□□□□ -0.89
NDE1-201ENST00000396354 SMG8Q8ND04 991 aaKnown RBP9.49□□□□□ -0.89
NDE1-201ENST00000396354 KCNK16Q96T55 309 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 APBA2Q99767 749 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 ECSITQ9BQ95 431 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 THAP1Q9NVV9 213 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 CNTN3Q9P232 1028 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 SMIM28A0A1B0GU29 152 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 ATP6AP2A0A1C7CYW4 349 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 DFFAO00273 331 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 TPST1O60507 370 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 ATP6AP2O75787 350 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 JUNP05412 331 aaKnown RBP9.49□□□□□ -0.89
NDE1-201ENST00000396354 CPA3P15088 417 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 GSTT1P30711 240 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 ACAP1Q15027 740 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 TEDDM1Q5T9Z0 273 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 OTUD1Q5VV17 481 aaPredicted RBP9.49□□□□□ -0.89
NDE1-201ENST00000396354 SH2D5Q6ZV89 423 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 PIGZQ86VD9 579 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 PCDH20Q8N6Y1 951 aaKnown RBP9.49□□□□□ -0.89
NDE1-201ENST00000396354 TRPV1Q8NER1 839 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 FCRL3Q96P31 734 aaPredicted RBP9.49□□□□□ -0.89
NDE1-201ENST00000396354 LENG8Q96PV6 779 aaPredicted RBP9.49□□□□□ -0.89
NDE1-201ENST00000396354 SLC4A5Q9BY07 1137 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 COPS7BQ9H9Q2 264 aaPredicted RBP9.49□□□□□ -0.89
NDE1-201ENST00000396354 SNX15Q9NRS6 342 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 TMEM30AQ9NV96 361 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 EMCNQ9ULC0 261 aa9.49□□□□□ -0.89
NDE1-201ENST00000396354 A0A088AWK7 358 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 A0A096LPK6 155 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 SDR42E2A6NKP2 422 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 ZBTB14O43829 449 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 STAU1O95793 577 aaKnown RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 HNRNPLP14866 589 aaKnown RBP eCLIP9.48□□□□□ -0.89
NDE1-201ENST00000396354 CYP2B6P20813 491 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 IDH3AP50213 366 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 GRIK3Q13003 919 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 TAF1CQ15572 869 aaPredicted RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 TEX44Q53QW1 395 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 PPP1R2P3Q6NXS1 205 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 CYP2R1Q6VVX0 501 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 SPATA24Q86W54 205 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 CHSY1Q86X52 802 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 SIX6OS1Q8N1H7 587 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 SPATA22Q8NHS9 363 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 SLC45A3Q96JT2 553 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 CDRT15Q96T59 188 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 SUDS3Q9H7L9 328 aaPredicted RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 LRRC4Q9HBW1 653 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 MTMR10Q9NXD2 777 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 GTSE1Q9NYZ3 720 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 ADA2Q9NZK5 511 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 TTC24A2A3L6 582 aaPredicted RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 MANSC4A6NHS7 340 aaPredicted RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 PTGESO14684 152 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 BUD23O43709 281 aaKnown RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 JCHAINP01591 159 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms