RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 NLRP14Q86W24 1093 aa13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 FRMD1Q8N878 549 aa13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 OR8K1Q8NGG5 319 aa13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 ZNF653Q96CK0 615 aa13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 PSMB7Q99436 277 aa13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 ZYG11BQ9C0D3 744 aa13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 ITM2CQ9NQX7 267 aa13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 MPP6Q9NZW5 540 aa13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 CNOT8Q9UFF9 292 aaKnown RBP13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 FZD10Q9ULW2 581 aa13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 SCINQ9Y6U3 715 aa13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 ASCC3Q8N3C0 2202 aaKnown RBP13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 ANKRD36A6QL64 1941 aa13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 CEP295Q9C0D2 2601 aa13.72□□□□□ -0.21
HLA-DMA-202ENST00000395303 SHROOM3Q8TF72 1996 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 CXorf51AA0A1B0GTR3 108 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 SSU72P8A0A1W2PR75 194 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 ILVBLA1L0T0 632 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 BCLAF3A2AJT9 711 aaKnown RBP13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 FAM72CH0Y354 149 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 SLC30A4O14863 429 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 AP5Z1O43299 807 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 ATP9BO43861 1147 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 LRIG2O94898 1065 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 RHOCP08134 193 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 L1CAMP32004 1257 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 TBX2Q13207 712 aaPredicted RBP13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 SEMA3BQ13214 749 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 ACAP1Q15027 740 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 ASTE1Q2TB18 679 aaPredicted RBP13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 C6orf118Q5T5N4 469 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 C9orf64Q5T6V5 341 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 FAM72AQ5TYM5 149 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 RNF219Q5W0B1 726 aaPredicted RBP13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 FAM72DQ6L9T8 149 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 ALKBH5Q6P6C2 394 aaKnown RBP13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 SLFN11Q7Z7L1 901 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 FAM72BQ86X60 149 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 ARFGAP1Q8N6T3 406 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 ZNF366Q8N895 744 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 SIPA1Q96FS4 1042 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 MAGEB5Q9BZ81 275 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 RSPH9Q9H1X1 276 aaPredicted RBP13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 MRPL47Q9HD33 250 aaKnown RBP13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 CD93Q9NPY3 652 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 SEMA4GQ9NTN9 838 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 TMEM248Q9NWD8 314 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 WSB2Q9NYS7 404 aaPredicted RBP13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 SLCO3A1Q9UIG8 710 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 CHD6Q8TD26 2715 aa13.71□□□□□ -0.21
HLA-DMA-202ENST00000395303 PCDH15Q96QU1 1955 aa13.71□□□□□ -0.22
HLA-DMA-202ENST00000395303 CABIN1Q9Y6J0 2220 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 CNOT1A5YKK6 2376 aaKnown RBP13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 EDDM13A0A1B0GTR0 161 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 TTC34A8MYJ7 566 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 SRGAP2O75044 1071 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 MFAP3LO75121 409 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 CYP1A2P05177 515 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 ADRB1P08588 477 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 ZNF806P0C7X5 589 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 RHOQP17081 205 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 DESP17661 470 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 OR1E1P30953 314 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 EIF4A3P38919 411 aaKnown RBP13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 MAPKAPK2P49137 400 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 STK19P49842 368 aaPredicted RBP13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 TPMTP51580 245 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 RPS14P62263 151 aaKnown RBP13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 ZBTB16Q05516 673 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 CSRP2Q16527 193 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 PEAR1Q5VY43 1037 aaPredicted RBP13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 KIAA1324Q6UXG2 1013 aaKnown RBP13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 LPCAT2Q7L5N7 544 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 TFAP2DQ7Z6R9 452 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 DCAF4L2Q8NA75 395 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 NETO1Q8TDF5 533 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 FRS2Q8WU20 508 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 PRCCQ92733 491 aaPredicted RBP13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 PTPRN2Q92932 1015 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 TBC1D31Q96DN5 1066 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 ERLEC1Q96DZ1 483 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 RPL10LQ96L21 214 aaKnown RBP13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 NCAPGQ9BPX3 1015 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 TRIM7Q9C029 511 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 ARRDC1-AS1Q9H2J1 176 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 MTG2Q9H4K7 406 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 VPS28Q9UK41 221 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 CYP8B1Q9UNU6 501 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 HS3ST2Q9Y278 367 aa13.7□□□□□ -0.22
HLA-DMA-202ENST00000395303 TRPM6Q9BX84 2022 aa13.69□□□□□ -0.22
HLA-DMA-202ENST00000395303 PCNX2A6NKB5 2137 aa13.69□□□□□ -0.22
HLA-DMA-202ENST00000395303 LAMA1P25391 3075 aa13.69□□□□□ -0.22
HLA-DMA-202ENST00000395303 A0A0D9SEW6 157 aa13.69□□□□□ -0.22
HLA-DMA-202ENST00000395303 WASH4PA8MWX3 477 aa13.69□□□□□ -0.22
HLA-DMA-202ENST00000395303 EIF3CLB5ME19 914 aaKnown RBP13.69□□□□□ -0.22
HLA-DMA-202ENST00000395303 FOXD2O60548 495 aaPredicted RBP13.69□□□□□ -0.22
HLA-DMA-202ENST00000395303 SIN3BO75182 1162 aa13.69□□□□□ -0.22
HLA-DMA-202ENST00000395303 ZMPSTE24O75844 475 aa13.69□□□□□ -0.22
HLA-DMA-202ENST00000395303 KRT37O76014 449 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms