RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 PSMB4P28070 264 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 HPCAP84074 193 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 POLD3Q15054 466 aaPredicted RBP14.51□□□□□ -0.09
RTF1-201ENST00000389629 AGAP9Q5VTM2 703 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 SAPCD2Q86UD0 394 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 ATPAF2Q8N5M1 289 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 NAT8LQ8N9F0 302 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 SLC35B2Q8TB61 432 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 HPS1Q92902 700 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 COX4I2Q96KJ9 171 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 VTI1BQ9UEU0 232 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 PRPF19Q9UMS4 504 aaKnown RBP14.51□□□□□ -0.09
RTF1-201ENST00000389629 CLUHO75153 1309 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 MPOP05164 745 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 CYP2C8P10632 490 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 NCAM1P13591 858 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 CNTN2Q02246 1040 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 STYK1Q6J9G0 422 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 PACS1Q6VY07 963 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 SHCBP1Q8NEM2 672 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 FNIP1Q8TF40 1166 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 TSPAN17Q96FV3 270 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 C9orf16Q9BUW7 83 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 CNGB3Q9NQW8 809 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 NOD1Q9Y239 953 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 ZNF862O60290 1169 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 HBP1O60381 514 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 ZBTB11O95625 1053 aaPredicted RBP14.51□□□□□ -0.09
RTF1-201ENST00000389629 T-ENOLP0DO92 83 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 SLC6A3Q01959 620 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 CGB2Q6NT52 195 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 OR52K1Q8NGK4 314 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 OSBPL6Q9BZF3 934 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 HMG20AQ9NP66 347 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 SLIT2O94813 1529 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 A0A087WZ62 844 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 C19orf81C9J6K1 198 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 PMM2O15305 246 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 RGS5O15539 181 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 NR4A1P22736 598 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 PLCL1Q15111 1095 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 TCEAL1Q15170 157 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 TRMT10BQ6PF06 316 aaKnown RBP14.51□□□□□ -0.09
RTF1-201ENST00000389629 MICALL2Q8IY33 904 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 LGMNQ99538 433 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 KCTD14Q9BQ13 255 aaPredicted RBP14.51□□□□□ -0.09
RTF1-201ENST00000389629 FDXACB1Q9BRP7 624 aaPredicted RBP14.51□□□□□ -0.09
RTF1-201ENST00000389629 BBS2Q9BXC9 721 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 DDIT4Q9NX09 232 aa14.51□□□□□ -0.09
RTF1-201ENST00000389629 CPSF3Q9UKF6 684 aaKnown RBP14.51□□□□□ -0.09
RTF1-201ENST00000389629 MRPL42Q9Y6G3 142 aaKnown RBP14.51□□□□□ -0.09
RTF1-201ENST00000389629 VTNP04004 478 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 NFICP08651 508 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 IL5RAQ01344 420 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 LY6KQ17RY6 165 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 BBS5Q8N3I7 341 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 FAR2Q96K12 515 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 MRIQ9BWK5 157 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 ASPSCR1Q9BZE9 553 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 CDH19Q9H159 772 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 TRIM17Q9Y577 477 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 VNN1O95497 513 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 TSPAN8P19075 237 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 CCNA2P20248 432 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 NR2C2P49116 596 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 GTF2A2P52657 109 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 CACNB2Q08289 660 aaPredicted RBP14.5□□□□□ -0.09
RTF1-201ENST00000389629 ERO1BQ86YB8 467 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 PDSS2Q86YH6 399 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 DCPSQ96C86 337 aaKnown RBP14.5□□□□□ -0.09
RTF1-201ENST00000389629 EGFL8Q99944 293 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 ACE2Q9BYF1 805 aaPredicted RBP14.5□□□□□ -0.09
RTF1-201ENST00000389629 STN1Q9H668 368 aaKnown RBP14.5□□□□□ -0.09
RTF1-201ENST00000389629 SNX15Q9NRS6 342 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 KLK14Q9P0G3 267 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 ARHGAP28Q9P2N2 729 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 PIN4Q9Y237 131 aaKnown RBP14.5□□□□□ -0.09
RTF1-201ENST00000389629 FAM149AA5PLN7 773 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 ASNA1O43681 348 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 GAS2O43903 313 aaKnown RBP14.5□□□□□ -0.09
RTF1-201ENST00000389629 WDR47O94967 919 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 CDH15P55291 814 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 KLF1Q13351 362 aaPredicted RBP14.5□□□□□ -0.09
RTF1-201ENST00000389629 P3H2Q8IVL5 708 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 URGCPQ8TCY9 931 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 PABPC5Q96DU9 382 aaKnown RBP14.5□□□□□ -0.09
RTF1-201ENST00000389629 CERS2Q96G23 380 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 A0A0A0MRY4 1105 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 NCF1BA6NI72 391 aaPredicted RBP14.5□□□□□ -0.09
RTF1-201ENST00000389629 NCF1CA8MVU1 366 aaPredicted RBP14.5□□□□□ -0.09
RTF1-201ENST00000389629 E5RI56 91 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 FKBP9O95302 570 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 NCF1P14598 390 aaPredicted RBP14.5□□□□□ -0.09
RTF1-201ENST00000389629 FKBP9P1Q75LS8 142 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 HERC6Q8IVU3 1022 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 ACMSDQ8TDX5 336 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 OTUD5Q96G74 571 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 SPATA13Q96N96 652 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 FIZ1Q96SL8 496 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 C6orf62Q9GZU0 229 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms