RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 ARRDC3Q96B67 414 aa2.55□□□□□ -2
RNU6-541P-201ENST00000384709 KTI12Q96EK9 354 aaPredicted RBP2.55□□□□□ -2
RNU6-541P-201ENST00000384709 MPHOSPH6Q99547 160 aaKnown RBP2.55□□□□□ -2
RNU6-541P-201ENST00000384709 EBF3Q9H4W6 596 aa2.55□□□□□ -2
RNU6-541P-201ENST00000384709 PNRC2Q9NPJ4 139 aaKnown RBP2.55□□□□□ -2
RNU6-541P-201ENST00000384709 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.55□□□□□ -2
RNU6-541P-201ENST00000384709 GRHPRQ9UBQ7 328 aa2.55□□□□□ -2
RNU6-541P-201ENST00000384709 COG5Q9UP83 839 aa2.55□□□□□ -2
RNU6-541P-201ENST00000384709 GREB1LQ9C091 1923 aaPredicted RBP2.54□□□□□ -2
RNU6-541P-201ENST00000384709 TMEM272A0A1B0GTI8 110 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 TMEM247A6NEH6 219 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 C17orf100A8MU93 164 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 SMAD6O43541 496 aaKnown RBP2.54□□□□□ -2
RNU6-541P-201ENST00000384709 NFATC1O95644 943 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 TK1P04183 234 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 CHRNB1P11230 501 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 PEPDP12955 493 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 ARSAP15289 507 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 PRKCHP24723 683 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 CHRNA5P30532 468 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 ADD2P35612 726 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 PNPLA4P41247 253 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 GRK6P43250 576 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 RFX2P48378 723 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 MVDP53602 400 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 POLGP54098 1239 aaPredicted RBP2.54□□□□□ -2
RNU6-541P-201ENST00000384709 NANOS2P60321 138 aaKnown RBP2.54□□□□□ -2
RNU6-541P-201ENST00000384709 THOC5Q13769 683 aaKnown RBP2.54□□□□□ -2
RNU6-541P-201ENST00000384709 DUSP6Q16828 381 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 ODF3L2Q3SX64 289 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 ENTPD8Q5MY95 495 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 GGT6Q6P531 493 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 SLC30A9Q6PML9 568 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 PARM1Q6UWI2 310 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 TRAPPC11Q7Z392 1133 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 GALNT7Q86SF2 657 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 GPSM1Q86YR5 675 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 KLBQ86Z14 1044 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 FAM185AQ8N0U4 392 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 B4GALNT2Q8NHY0 566 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 TMEM163Q8TC26 289 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 TMEM174Q8WUU8 243 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 IP6K1Q92551 441 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 INPP5DQ92835 1189 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 URB1-AS1Q96HZ7 61 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 LYZL4Q96KX0 146 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 NLRP4Q96MN2 994 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 TRAPPC9Q96Q05 1148 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 RPS6KC1Q96S38 1066 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 HDHD5Q9BXW7 423 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.54□□□□□ -2
RNU6-541P-201ENST00000384709 RASSF1Q9NS23 344 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 ZDHHC7Q9NXF8 308 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 OSGIN2Q9Y236 505 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 SLC4A4Q9Y6R1 1079 aa2.54□□□□□ -2
RNU6-541P-201ENST00000384709 CXorf65A6NEN9 183 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 SAC3D1A6NKF1 404 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 E7EVH7 732 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 ZC3H11AO75152 810 aaKnown RBP eCLIP2.53□□□□□ -2
RNU6-541P-201ENST00000384709 LDHAP00338 332 aaKnown RBP2.53□□□□□ -2
RNU6-541P-201ENST00000384709 MYZAPP0CAP1 466 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 ACP5P13686 325 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 GNLYP22749 145 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 AVPR2P30518 371 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 CCKARP32238 428 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 CIITAP33076 1130 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 RPS6KA3P51812 740 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 PRKAA2P54646 552 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 PMPCAQ10713 525 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 ALKBH1Q13686 389 aaKnown RBP2.53□□□□□ -2
RNU6-541P-201ENST00000384709 PTGR1Q14914 329 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 POSTNQ15063 836 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 PDCD2Q16342 344 aaPredicted RBP2.53□□□□□ -2
RNU6-541P-201ENST00000384709 CCDC174Q6PII3 467 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 LVRNQ6Q4G3 990 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 HERC6Q8IVU3 1022 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 SLC25A41Q8N5S1 370 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 TMEM217Q8N7C4 229 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 ENGASEQ8NFI3 743 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 C3orf49Q96BT1 292 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 WDR77Q9BQA1 342 aaPredicted RBP2.53□□□□□ -2
RNU6-541P-201ENST00000384709 ISCA1Q9BUE6 129 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 PLEKHA2Q9HB19 425 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 PLAC1Q9HBJ0 212 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 ZNF304Q9HCX3 659 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 SAYSD1Q9NPB0 183 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 SIRT3Q9NTG7 399 aaPredicted RBP2.53□□□□□ -2
RNU6-541P-201ENST00000384709 FBXO40Q9UH90 709 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 CD207Q9UJ71 328 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 BAG5Q9UL15 447 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 RIPOR2Q9Y4F9 1068 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 COMMD10Q9Y6G5 202 aa2.53□□□□□ -2
RNU6-541P-201ENST00000384709 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
RNU6-541P-201ENST00000384709 hCG_1642624A0A1W2PR95 340 aa2.52□□□□□ -2.01
RNU6-541P-201ENST00000384709 SEPT4O43236 478 aa2.52□□□□□ -2.01
RNU6-541P-201ENST00000384709 MSI1O43347 362 aaKnown RBP2.52□□□□□ -2.01
RNU6-541P-201ENST00000384709 METTL18O95568 372 aa2.52□□□□□ -2.01
RNU6-541P-201ENST00000384709 CRYABP02511 175 aaKnown RBP2.52□□□□□ -2.01
RNU6-541P-201ENST00000384709 ALPLP05186 524 aa2.52□□□□□ -2.01
RNU6-541P-201ENST00000384709 CNPP09543 421 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms