RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 CYP2D6P10635 497 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 SPNP16150 400 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 CBLP22681 906 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 GLRA2P23416 452 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 PIK3R1P27986 724 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 GRIA1P42261 906 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 QARSP47897 775 aaKnown RBP8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 LEPRP48357 1165 aaKnown RBP8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 HCAR3P49019 387 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 PTPN5P54829 565 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 POLR2GP62487 172 aaKnown RBP eCLIP8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 C1QBPQ07021 282 aaKnown RBP8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 POLD3Q15054 466 aaPredicted RBP8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 C16orf89Q6UX73 402 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 SPATC1Q76KD6 591 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 FRMD5Q7Z6J6 570 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 RHPN2Q8IUC4 686 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 CPA6Q8N4T0 437 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 SPATA18Q8TC71 538 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 DLG3Q92796 817 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 SH3KBP1Q96B97 665 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 CSF3RQ99062 836 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 LPIN3Q9BQK8 851 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 SLA2Q9H6Q3 261 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 ERVMER34-1Q9H9K5 563 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 SMOXQ9NWM0 555 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 ADA2Q9NZK5 511 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 MAN2B2Q9Y2E5 1009 aa8.67□□□□□ -1.02
NHLRC3-201ENST00000379599 TEX51A0A1B0GUA7 166 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 TRIM64A6NGJ6 449 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 TRIM64BA6NI03 449 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 TRIM49D1C9J1S8 452 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 H0Y858 1186 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 SHOXO15266 292 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 SNRPAP09012 282 aaKnown RBP8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 CASP4P49662 377 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 LSM3P62310 102 aaKnown RBP8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 DBPQ10586 325 aaPredicted RBP8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 CEACAM7Q14002 265 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 ZMYND11Q15326 602 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 KCNT1Q5JUK3 1230 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 ARCQ7LC44 396 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 HAUS6Q7Z4H7 955 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 KYQ8NBH2 561 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 PIWIL2Q8TC59 973 aaKnown RBP8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 CABLES1Q8TDN4 633 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 SEPT1Q8WYJ6 367 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 GTF2H4Q92759 462 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 TOE1Q96GM8 510 aaKnown RBP8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 NGLY1Q96IV0 654 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 TRIM15Q9C019 465 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 NUDT5Q9UKK9 219 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 BCS1LQ9Y276 419 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 IPPQ9Y573 584 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 DDX60Q8IY21 1712 aaKnown RBP8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 PEAK1Q9H792 1746 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 A0A0G2JMP0 313 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 E7ENX8 843 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 BCAS1O75363 584 aaPredicted RBP8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 AKAP3O75969 853 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 CALB1P05937 261 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 GSTM2P28161 218 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 ETV1P50549 477 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 RAD51Q06609 339 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 ZNF33BQ06732 778 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 GRSF1Q12849 480 aaKnown RBP eCLIP8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 BFSP1Q12934 665 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 SELPLGQ14242 412 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 PLCL1Q15111 1095 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 RINT1Q6NUQ1 792 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 ZNF438Q7Z4V0 828 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 DSELQ8IZU8 1212 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 OR13F1Q8NGS4 319 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 OR10Z1Q8NGY1 313 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 TFAP2CQ92754 450 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 LENG8Q96PV6 779 aaPredicted RBP8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 RTKNQ9BST9 563 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 DGCR6LQ9BY27 220 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 ACSS3Q9H6R3 686 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 VRTNQ9H8Y1 702 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 SYBUQ9NX95 663 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 TLK1Q9UKI8 766 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 MRPS7Q9Y2R9 242 aaKnown RBP8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 NFAT5O94916 1531 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 CLUHO75153 1309 aa8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 PARP4Q9UKK3 1724 aaKnown RBP8.66□□□□□ -1.02
NHLRC3-201ENST00000379599 GTPBP10A4D1E9 387 aaKnown RBP8.65□□□□□ -1.02
NHLRC3-201ENST00000379599 H0YJX3 145 aa8.65□□□□□ -1.02
NHLRC3-201ENST00000379599 PGK2P07205 417 aa8.65□□□□□ -1.02
NHLRC3-201ENST00000379599 PSKH1P11801 424 aa8.65□□□□□ -1.02
NHLRC3-201ENST00000379599 ITGALP20701 1170 aa8.65□□□□□ -1.02
NHLRC3-201ENST00000379599 CYP2C18P33260 490 aa8.65□□□□□ -1.02
NHLRC3-201ENST00000379599 GAD2Q05329 585 aa8.65□□□□□ -1.02
NHLRC3-201ENST00000379599 ILF2Q12905 390 aaKnown RBP8.65□□□□□ -1.02
NHLRC3-201ENST00000379599 ART3Q13508 389 aa8.65□□□□□ -1.02
NHLRC3-201ENST00000379599 ZNF267Q14586 743 aaPredicted RBP8.65□□□□□ -1.02
NHLRC3-201ENST00000379599 NHSL2Q5HYW2 709 aa8.65□□□□□ -1.02
NHLRC3-201ENST00000379599 KRT28Q7Z3Y7 464 aa8.65□□□□□ -1.02
NHLRC3-201ENST00000379599 TLK2Q86UE8 772 aa8.65□□□□□ -1.02
NHLRC3-201ENST00000379599 LCORLQ8N3X6 602 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms