RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 TRAPPC12Q8WVT3 735 aa15.85■□□□□ 0.13
FXN-201ENST00000377270 TMA16Q96EY4 203 aaKnown RBP15.85■□□□□ 0.13
FXN-201ENST00000377270 SPATA33Q96N06 139 aa15.85■□□□□ 0.13
FXN-201ENST00000377270 UROC1Q96N76 676 aa15.85■□□□□ 0.13
FXN-201ENST00000377270 RANBP9Q96S59 729 aa15.85■□□□□ 0.13
FXN-201ENST00000377270 SCPEP1Q9HB40 452 aa15.85■□□□□ 0.13
FXN-201ENST00000377270 SSU72Q9NP77 194 aaKnown RBP15.85■□□□□ 0.13
FXN-201ENST00000377270 DCAF16Q9NXF7 216 aa15.85■□□□□ 0.13
FXN-201ENST00000377270 SLC25A27O95847 323 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 GJB1P08034 283 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 WEE2P0C1S8 567 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 M6PRP20645 277 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 ADRA1DP25100 572 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 PTGS2P35354 604 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 CPA2P48052 419 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 TPTEP56180 551 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 MAP3K7CLP57077 242 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 RPL7AP62424 266 aaKnown RBP15.84■□□□□ 0.13
FXN-201ENST00000377270 GRM1Q13255 1194 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 GPR141Q7Z602 305 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 TTC7BQ86TV6 843 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 ERO1BQ86YB8 467 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 CPNE9Q8IYJ1 553 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 ZNF276Q8N554 614 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 ATP2A3Q93084 1043 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 RMDN1Q96DB5 314 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 NLRP4Q96MN2 994 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 HERC2P3Q9BVR0 1158 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 MANSC1Q9H8J5 431 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 CISHQ9NSE2 258 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 RBPJLQ9UBG7 517 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 CPSF3Q9UKF6 684 aaKnown RBP15.84■□□□□ 0.13
FXN-201ENST00000377270 H3BRJ5 948 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 FCHO1O14526 889 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 MMP8P22894 467 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 NKX2-5P52952 324 aaPredicted RBP15.84■□□□□ 0.13
FXN-201ENST00000377270 MLLT6P55198 1093 aaPredicted RBP15.84■□□□□ 0.13
FXN-201ENST00000377270 C1orf146Q5VVC0 180 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 XKR5Q6UX68 686 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 AMIGO2Q86SJ2 522 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 CDR2LQ86X02 465 aaPredicted RBP15.84■□□□□ 0.13
FXN-201ENST00000377270 FBXO16Q8IX29 292 aaPredicted RBP15.84■□□□□ 0.13
FXN-201ENST00000377270 KATNAL2Q8IYT4 538 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 ULK2Q8IYT8 1036 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 AHI1Q8N157 1196 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 UBR7Q8N806 425 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 COPS5Q92905 334 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 BTBD9Q96Q07 612 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 ADAMTS6Q9UKP5 1117 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 ERGIC3Q9Y282 383 aa15.84■□□□□ 0.13
FXN-201ENST00000377270 B8ZZF3 427 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 TGDSO95455 350 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 KRT6AP02538 564 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 KRT6BP04259 564 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 GNG2P59768 71 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 KLF1Q13351 362 aaPredicted RBP15.83■□□□□ 0.13
FXN-201ENST00000377270 KCTD2Q14681 263 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 SCARA5Q6ZMJ2 495 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 RNF111Q6ZNA4 994 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 PLPPR4Q7Z2D5 763 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 ANKS1BQ7Z6G8 1248 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 CLIP4Q8N3C7 705 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 ZCCHC9Q8N567 271 aaKnown RBP15.83■□□□□ 0.13
FXN-201ENST00000377270 CCDC89Q8N998 374 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 OXNAD1Q96HP4 312 aaPredicted RBP15.83■□□□□ 0.13
FXN-201ENST00000377270 PSD2Q9BQI7 771 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 TSSK1BQ9BXA7 367 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 FOXP3Q9BZS1 431 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 NIF3L1Q9GZT8 377 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 C2orf40Q9H1Z8 148 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 S100A14Q9HCY8 104 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 SLC7A8Q9UHI5 535 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 VANGL2Q9ULK5 521 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 PLA2G4CQ9UP65 541 aa15.83■□□□□ 0.13
FXN-201ENST00000377270 IGKV6-21A0A0C4DH24 114 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 INO80B-WBP1J3KQ70 363 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 GAS2O43903 313 aaKnown RBP15.83■□□□□ 0.12
FXN-201ENST00000377270 KLHL41O60662 606 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 ATP13A4Q4VNC1 1196 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 GALNT13Q8IUC8 556 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 RBM15BQ8NDT2 890 aaKnown RBP15.83■□□□□ 0.12
FXN-201ENST00000377270 THAP11Q96EK4 314 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 CLPTM1LQ96KA5 538 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 TBCBQ99426 244 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 MMP19Q99542 508 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 FERMT1Q9BQL6 677 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 INO80BQ9C086 356 aaPredicted RBP15.83■□□□□ 0.12
FXN-201ENST00000377270 VPS11Q9H270 941 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 SAYSD1Q9NPB0 183 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 KLHL11Q9NVR0 708 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 ARMCX1Q9P291 453 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 A0A0G2JMZ2 1700 aa15.83■□□□□ 0.12
FXN-201ENST00000377270 GOLGA8QA0A0J9YX86 632 aa15.82■□□□□ 0.12
FXN-201ENST00000377270 GOLGA8OA6NCC3 632 aa15.82■□□□□ 0.12
FXN-201ENST00000377270 GOLGA8NF8WBI6 632 aa15.82■□□□□ 0.12
FXN-201ENST00000377270 GOLGA8RI6L899 631 aa15.82■□□□□ 0.12
FXN-201ENST00000377270 CXCL11O14625 94 aa15.82■□□□□ 0.12
FXN-201ENST00000377270 B4GALT5O43286 388 aa15.82■□□□□ 0.12
FXN-201ENST00000377270 CAPN1P07384 714 aa15.82■□□□□ 0.12
FXN-201ENST00000377270 DLDP09622 509 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms