RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 R3HCC1Q9Y3T6 440 aaKnown RBP12.71□□□□□ -0.37
HDAC8-204ENST00000373560 KIF3AQ9Y496 699 aa12.71□□□□□ -0.37
HDAC8-204ENST00000373560 C9orf172C9J069 976 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 PRAMEF26H0Y7S4 382 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 K7EM74 188 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 SLC31A1O15431 190 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 PLRG1O43660 514 aaKnown RBP12.7□□□□□ -0.38
HDAC8-204ENST00000373560 MAGEC1O60732 1142 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 ATP5BP06576 529 aaKnown RBP12.7□□□□□ -0.38
HDAC8-204ENST00000373560 PRF1P14222 555 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 POLR2EP19388 210 aaKnown RBP12.7□□□□□ -0.38
HDAC8-204ENST00000373560 CSKP41240 450 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 SPIDRQ14159 915 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 MPPE1Q53F39 396 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 AGBL4Q5VU57 503 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 BRICD5Q6PL45 260 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 MMS22LQ6ZRQ5 1243 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 TRIM69Q86WT6 500 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 SLC35F3Q8IY50 421 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 GPD1LQ8N335 351 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 ZSCAN1Q8NBB4 408 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 RAD54LQ92698 747 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 ACCSQ96QU6 501 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 TUBD1Q9UJT1 453 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 DMTF1Q9Y222 760 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 HIVEP1P15822 2718 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 SHANK1Q9Y566 2161 aa12.7□□□□□ -0.38
HDAC8-204ENST00000373560 NVLO15381 856 aaKnown RBP12.69□□□□□ -0.38
HDAC8-204ENST00000373560 LDHAP00338 332 aaKnown RBP12.69□□□□□ -0.38
HDAC8-204ENST00000373560 IL1BP01584 269 aa12.69□□□□□ -0.38
HDAC8-204ENST00000373560 C5AR1P21730 350 aa12.69□□□□□ -0.38
HDAC8-204ENST00000373560 STK19P49842 368 aaPredicted RBP12.69□□□□□ -0.38
HDAC8-204ENST00000373560 TAS2R38P59533 333 aa12.69□□□□□ -0.38
HDAC8-204ENST00000373560 COG7P83436 770 aa12.69□□□□□ -0.38
HDAC8-204ENST00000373560 TPRG1LQ5T0D9 272 aa12.69□□□□□ -0.38
HDAC8-204ENST00000373560 RFWD3Q6PCD5 774 aa12.69□□□□□ -0.38
HDAC8-204ENST00000373560 MAMDC2Q7Z304 686 aaPredicted RBP12.69□□□□□ -0.38
HDAC8-204ENST00000373560 WDR49Q8IV35 697 aa12.69□□□□□ -0.38
HDAC8-204ENST00000373560 THAP11Q96EK4 314 aa12.69□□□□□ -0.38
HDAC8-204ENST00000373560 DUSP23Q9BVJ7 150 aa12.69□□□□□ -0.38
HDAC8-204ENST00000373560 MARCH2Q9P0N8 246 aa12.69□□□□□ -0.38
HDAC8-204ENST00000373560 SLCO3A1Q9UIG8 710 aa12.69□□□□□ -0.38
HDAC8-204ENST00000373560 SARDHQ9UL12 918 aa12.69□□□□□ -0.38
HDAC8-204ENST00000373560 LOXL2Q9Y4K0 774 aa12.69□□□□□ -0.38
HDAC8-204ENST00000373560 APCP25054 2843 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 GOLGA6L7A0A1B0GV03 622 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 REC8O95072 547 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 GCNT3O95395 438 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 FAM163BP0C2L3 166 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 FAM200BP0CF97 657 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 ABCD1P33897 745 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 KIF11P52732 1056 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 NR0B2Q15466 257 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 TRIP4Q15650 581 aaPredicted RBP12.68□□□□□ -0.38
HDAC8-204ENST00000373560 SETMARQ53H47 684 aaPredicted RBP12.68□□□□□ -0.38
HDAC8-204ENST00000373560 CCDC186Q7Z3E2 898 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 TMPRSS9Q7Z410 1059 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 PTPRN2Q92932 1015 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 PMEPA1Q969W9 287 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 TTC17Q96AE7 1141 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 ABHD17AQ96GS6 310 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 TWNKQ96RR1 684 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 TCEAL2Q9H3H9 227 aaPredicted RBP12.68□□□□□ -0.38
HDAC8-204ENST00000373560 MRPL44Q9H9J2 332 aaKnown RBP12.68□□□□□ -0.38
HDAC8-204ENST00000373560 SEPT10Q9P0V9 454 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 ERVW-1Q9UQF0 538 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 PCDHA5Q9Y5H7 936 aa12.68□□□□□ -0.38
HDAC8-204ENST00000373560 ITIH6Q6UXX5 1313 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 HIVEP3Q5T1R4 2406 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 PRR19A6NJB7 356 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 D6RAR5 112 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 DUX1O43812 170 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 TBL1XO60907 577 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 RNGTTO60942 597 aaKnown RBP12.67□□□□□ -0.38
HDAC8-204ENST00000373560 JMJD7P0C870 316 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 DLATP10515 647 aaKnown RBP12.67□□□□□ -0.38
HDAC8-204ENST00000373560 SLC6A4P31645 630 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 ARSDP51689 593 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 CNTN1Q12860 1018 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 FZD2Q14332 565 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 ARID5BQ14865 1188 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 FSCBQ5H9T9 825 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 DSG4Q86SJ6 1040 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 ZC3H18Q86VM9 953 aaKnown RBP12.67□□□□□ -0.38
HDAC8-204ENST00000373560 RBFAQ8N0V3 343 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 KCTD17Q8N5Z5 321 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 FBXO18Q8NFZ0 1043 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 TPCN2Q8NHX9 752 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 NDRG1Q92597 394 aaKnown RBP12.67□□□□□ -0.38
HDAC8-204ENST00000373560 USP7Q93009 1102 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 TMA16Q96EY4 203 aaKnown RBP12.67□□□□□ -0.38
HDAC8-204ENST00000373560 POM121Q96HA1 1249 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 RPL10LQ96L21 214 aaKnown RBP12.67□□□□□ -0.38
HDAC8-204ENST00000373560 PRICKLE1Q96MT3 831 aaPredicted RBP12.67□□□□□ -0.38
HDAC8-204ENST00000373560 GPR27Q9NS67 375 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 EVA1BQ9NVM1 165 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 CLIC5Q9NZA1 410 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 TPX2Q9ULW0 747 aaKnown RBP12.67□□□□□ -0.38
HDAC8-204ENST00000373560 PCDHGC3Q9UN70 934 aa12.67□□□□□ -0.38
HDAC8-204ENST00000373560 TP53TG5Q9Y2B4 290 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms