RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 G6PC3Q9BUM1 346 aa3.74□□□□□ -1.81
MCF2-202ENST00000370573 PACSIN1Q9BY11 444 aa3.74□□□□□ -1.81
MCF2-202ENST00000370573 CWH43Q9H720 699 aa3.74□□□□□ -1.81
MCF2-202ENST00000370573 TRIM10Q9UDY6 481 aa3.74□□□□□ -1.81
MCF2-202ENST00000370573 DUSP10Q9Y6W6 482 aa3.74□□□□□ -1.81
MCF2-202ENST00000370573 PTPRSQ13332 1948 aa3.74□□□□□ -1.81
MCF2-202ENST00000370573 NOTOA8MTQ0 251 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 TMCO5BA8MYB1 307 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 NT5C1B-RDH14C9J2C7 533 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 H0Y8X5 98 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 THAP12O43422 761 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 ZNF500O60304 480 aaPredicted RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 HUS1O60921 280 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 ATP2C2O75185 946 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 ULK1O75385 1050 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 AMHP03971 560 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 CYP1A1P04798 512 aaPredicted RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 GALTP07902 379 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 PFKMP08237 780 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 PAEPP09466 180 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 CCDC175P0C221 793 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 UNGP13051 313 aaPredicted RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 ANXA13P27216 316 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 GNL1P36915 607 aaPredicted RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 OR1G1P47890 313 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 CDR1P51861 262 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 YWHAEP62258 255 aaKnown RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 RNASELQ05823 741 aaKnown RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 FPGSQ05932 587 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 DUSP4Q13115 394 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 PPIGQ13427 754 aaKnown RBP eCLIP3.73□□□□□ -1.81
MCF2-202ENST00000370573 LONRF1Q17RB8 773 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 CCDC122Q5T0U0 273 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 ALKBH5Q6P6C2 394 aaKnown RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 DSTYKQ6XUX3 929 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 RNF111Q6ZNA4 994 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 TAS1R1Q7RTX1 841 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 ACOT1Q86TX2 421 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 TMEM173Q86WV6 379 aaPredicted RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 PPIL6Q8IXY8 311 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 ADGRF2Q8IZF7 708 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 CRYBG2Q8N1P7 616 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 C12orf29Q8N999 325 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 ZBTB34Q8NCN2 500 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 FAM156AQ8NDB6 213 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 APPL2Q8NEU8 664 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 OR6B3Q8NGW1 331 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 RSPH1Q8WYR4 309 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 CCDC140Q96MF4 163 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 FAM193BQ96PV7 902 aaPredicted RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 HERPUD2Q9BSE4 406 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 CDADC1Q9BWV3 514 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 ISCUQ9H1K1 167 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 EPB41L4BQ9H329 900 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 SNX25Q9H3E2 840 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 DEF6Q9H4E7 631 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 MARCH5Q9NX47 278 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 CYTH4Q9UIA0 394 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 STXBP5LQ9Y2K9 1186 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 PRG3Q9Y2Y8 225 aaPredicted RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 CHD9Q3L8U1 2897 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 A8MXQ7 604 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 TMEM189-UBE2V1I3L0A0 370 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 O00370 1275 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 PJA2O43164 708 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 BAIAP3O94812 1187 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 CPP00450 1065 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 FTLP02792 175 aaPredicted RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 ALDH2P05091 517 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 C1QTNF9P0C862 333 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 VDRP11473 427 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 CD19P15391 556 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 TYRP1P17643 537 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 ACAT1P24752 427 aaKnown RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 PPM1FP49593 454 aaPredicted RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 PDE6CP51160 858 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 RENBPP51606 427 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 VAV2P52735 878 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 GALCP54803 685 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 BCAR1P56945 870 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 SESN3P58005 492 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 KRT83P78385 493 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 PTP4A2Q12974 167 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 SPA17Q15506 151 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 SLC14A2Q15849 920 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 CNGA2Q16280 664 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 NAA35Q5VZE5 725 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 ACAD10Q6JQN1 1059 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 FSTL4Q6MZW2 842 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 LVRNQ6Q4G3 990 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 PAQR9Q6ZVX9 377 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 UNC93AQ86WB7 457 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 ZNF677Q86XU0 584 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 SPPL2CQ8IUH8 684 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 TTC39CQ8N584 583 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 CISD2Q8N5K1 135 aaKnown RBP3.73□□□□□ -1.81
MCF2-202ENST00000370573 POF1BQ8WVV4 589 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 CPA5Q8WXQ8 436 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 HERVK_113Q902F9 699 aa3.73□□□□□ -1.81
MCF2-202ENST00000370573 JADE3Q92613 823 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms