RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 PPIDQ08752 370 aaKnown RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 TEAD2Q15562 447 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 ANKRD22Q5VYY1 191 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 HTR3DQ70Z44 454 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 PDZD4Q76G19 769 aaPredicted RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 BZW1Q7L1Q6 419 aaKnown RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 CHSY1Q86X52 802 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 CIR1Q86X95 450 aaPredicted RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 LGI2Q8N0V4 545 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 ELMOD1Q8N336 334 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 MREGQ8N565 214 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 LZTR1Q8N653 840 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 C12orf76Q8N812 135 aaPredicted RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 MAB21L3Q8N8X9 362 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 TSEN2Q8NCE0 465 aaKnown RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 RIN3Q8TB24 985 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 CCDC110Q8TBZ0 833 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 CCHCR1Q8TD31 782 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 TFB1MQ8WVM0 346 aaKnown RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 HTR3CQ8WXA8 447 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 CPT1BQ92523 772 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 MRPS31Q92665 395 aaKnown RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 TIFAQ96CG3 184 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 MRPL38Q96DV4 380 aaKnown RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 ZNF419Q96HQ0 510 aaPredicted RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 ZSWIM3Q96MP5 696 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 PRICKLE1Q96MT3 831 aaPredicted RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 PWWP2AQ96N64 755 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 TSGA13Q96PP4 275 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 FAM129AQ9BZQ8 928 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 ZYG11BQ9C0D3 744 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 NACA2Q9H009 215 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 BRD8Q9H0E9 1235 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 CATSPERBQ9H7T0 1116 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 TLE6Q9H808 572 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 LAMA3Q16787 3333 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 TRAV19A0A0A6YYK7 116 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 CCDC195A0A1B0GUA6 201 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 SOBPA7XYQ1 873 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 TRDMT1O14717 391 aaKnown RBP9.73□□□□□ -0.85
VTA1-201ENST00000367621 NCAM2O15394 837 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 MAFKO60675 156 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 PPFIA2O75334 1257 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 METTL18O95568 372 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 FGF19O95750 216 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 LATS1O95835 1130 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 GLP2RO95838 553 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 IRF1P10914 325 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 PTPN3P26045 913 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 MAGEA6P43360 314 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 SLC11A2P49281 568 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 RPS24P62847 133 aaKnown RBP9.73□□□□□ -0.85
VTA1-201ENST00000367621 GAD2Q05329 585 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 HLTFQ14527 1009 aaKnown RBP eCLIP9.73□□□□□ -0.85
VTA1-201ENST00000367621 KCNJ11Q14654 390 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 UAP1Q16222 522 aaPredicted RBP9.73□□□□□ -0.85
VTA1-201ENST00000367621 ADGRF1Q5T601 910 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 PRPF38BQ5VTL8 546 aaKnown RBP9.73□□□□□ -0.85
VTA1-201ENST00000367621 IZUMO3Q5VZ72 239 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 LRRC31Q6UY01 552 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 TMEM184AQ6ZMB5 413 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 TMC3Q7Z5M5 1100 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 GRASPQ7Z6J2 395 aaPredicted RBP9.73□□□□□ -0.85
VTA1-201ENST00000367621 TFAP2DQ7Z6R9 452 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 CFAP52Q8N1V2 620 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 NAT8LQ8N9F0 302 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 OR52K2Q8NGK3 314 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 DEPDC1BQ8WUY9 529 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 PRCCQ92733 491 aaPredicted RBP9.73□□□□□ -0.85
VTA1-201ENST00000367621 HDAC11Q96DB2 347 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 GORASP1Q9BQQ3 440 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 SMG9Q9H0W8 520 aaKnown RBP9.73□□□□□ -0.85
VTA1-201ENST00000367621 EPB41L4BQ9H329 900 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 TASP1Q9H6P5 420 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 ANAPC5Q9UJX4 755 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 TPX2Q9ULW0 747 aaKnown RBP9.73□□□□□ -0.85
VTA1-201ENST00000367621 ARHGAP26Q9UNA1 814 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 CCL26Q9Y258 94 aa9.73□□□□□ -0.85
VTA1-201ENST00000367621 ZFP37Q9Y6Q3 630 aaPredicted RBP9.73□□□□□ -0.85
VTA1-201ENST00000367621 A0A0A0MRY4 1105 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 RASA4BC9J798 803 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 F5H5T6 163 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 KCNK1O00180 336 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 RNF103O00237 685 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 LEFTY2O00292 366 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 SCAMP3O14828 347 aaKnown RBP9.72□□□□□ -0.85
VTA1-201ENST00000367621 PPP1R12AO14974 1030 aaPredicted RBP9.72□□□□□ -0.85
VTA1-201ENST00000367621 RASA4O43374 803 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 XYLBO75191 536 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 TMEM63AO94886 807 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 CEBPBP17676 345 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 MX2P20592 715 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 DDX6P26196 483 aaKnown RBP eCLIP9.72□□□□□ -0.85
VTA1-201ENST00000367621 CD68P34810 354 aaPredicted RBP9.72□□□□□ -0.85
VTA1-201ENST00000367621 SERPINB6P35237 376 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 PAPOLAP51003 745 aaKnown RBP9.72□□□□□ -0.85
VTA1-201ENST00000367621 NDST2P52849 883 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 SKOR1P84550 965 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 CAV1Q03135 178 aa9.72□□□□□ -0.85
VTA1-201ENST00000367621 ZNF33AQ06730 810 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms