RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 ITM2AO43736 263 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 ZNF623O75123 536 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 PROCP04070 461 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 ERVK-10P10266 1014 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 CDC25CP30307 473 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 CYP2C18P33260 490 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 GALNT2Q10471 571 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 PRPSAP1Q14558 356 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 TRMT5Q32P41 509 aaKnown RBP17.84■□□□□ 0.45
TRIM11-202ENST00000366699 PM20D1Q6GTS8 502 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 DCLRE1AQ6PJP8 1040 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 LRRC74BQ6ZQY2 392 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 GBA3Q9H227 469 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 ADAM28Q9UKQ2 775 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 B3GAT3O94766 335 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 KLHL2O95198 593 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 CYP11A1P05108 521 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 AFF1P51825 1210 aaKnown RBP17.84■□□□□ 0.45
TRIM11-202ENST00000366699 CACNA2D1P54289 1103 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 ZNF33AQ06730 810 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 CCDC153Q494R4 210 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.84■□□□□ 0.457e-7■■■■■ 60.9
TRIM11-202ENST00000366699 PPFIBP2Q8ND30 876 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 OR52K1Q8NGK4 314 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 FBXO27Q8NI29 283 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 EDEM1Q92611 657 aa17.84■□□□□ 0.45
TRIM11-202ENST00000366699 PSMD3O43242 534 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 LYPLA1O75608 230 aaPredicted RBP17.83■□□□□ 0.45
TRIM11-202ENST00000366699 SPRP35270 261 aaPredicted RBP17.83■□□□□ 0.45
TRIM11-202ENST00000366699 NPY2RP49146 381 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 CDK7P50613 346 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 MXRA7P84157 204 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 MGAT3Q09327 533 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 ANO7Q6IWH7 933 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 FAM171BQ6P995 826 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 BEND5Q7L4P6 421 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 C10orf107Q8IVU9 208 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 THEM5Q8N1Q8 247 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 ZNF778Q96MU6 729 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 UROC1Q96N76 676 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 AGAP3Q96P47 875 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 OSBPL1AQ9BXW6 950 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 UPF3AQ9H1J1 476 aaKnown RBP17.83■□□□□ 0.45
TRIM11-202ENST00000366699 ANLNQ9NQW6 1124 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 COPG2Q9UBF2 871 aa17.83■□□□□ 0.45
TRIM11-202ENST00000366699 USP1O94782 785 aa17.83■□□□□ 0.44
TRIM11-202ENST00000366699 SKIP12755 728 aa17.83■□□□□ 0.44
TRIM11-202ENST00000366699 MYL4P12829 197 aa17.83■□□□□ 0.44
TRIM11-202ENST00000366699 DNAJB2P25686 324 aa17.83■□□□□ 0.44
TRIM11-202ENST00000366699 RABGGTBP53611 331 aa17.83■□□□□ 0.44
TRIM11-202ENST00000366699 MRPS35P82673 323 aaKnown RBP17.83■□□□□ 0.44
TRIM11-202ENST00000366699 ULK2Q8IYT8 1036 aa17.83■□□□□ 0.44
TRIM11-202ENST00000366699 TRPV1Q8NER1 839 aa17.83■□□□□ 0.44
TRIM11-202ENST00000366699 THTPAQ9BU02 230 aa17.83■□□□□ 0.44
TRIM11-202ENST00000366699 CASS4Q9NQ75 786 aa17.83■□□□□ 0.44
TRIM11-202ENST00000366699 SOX13Q9UN79 622 aa17.83■□□□□ 0.44
TRIM11-202ENST00000366699 ZBTB24O43167 697 aaPredicted RBP17.82■□□□□ 0.44
TRIM11-202ENST00000366699 CYBAP13498 195 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 PSEN1P49768 467 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 TUBB3Q13509 450 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 UBAP2LQ14157 1087 aaKnown RBP17.82■□□□□ 0.44
TRIM11-202ENST00000366699 CAPRIN2Q6IMN6 1127 aaKnown RBP17.82■□□□□ 0.44
TRIM11-202ENST00000366699 CES3Q6UWW8 571 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 TMEM135Q86UB9 458 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 TP53INP2Q8IXH6 220 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 DTX3LQ8TDB6 740 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 NRG4Q8WWG1 115 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 SCG3Q8WXD2 468 aaKnown RBP17.82■□□□□ 0.44
TRIM11-202ENST00000366699 ISL2Q96A47 359 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 RBBP8Q99708 897 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 OSBPL2Q9H1P3 480 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 TMEM30AQ9NV96 361 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 TMEM216Q9P0N5 145 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 ANGPTL2Q9UKU9 493 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 PADI3Q9ULW8 664 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 PGK1P00558 417 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 RALBP11234 206 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 THPOP40225 353 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 KLC1Q07866 573 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 GRIK3Q13003 919 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 PPM1JQ5JR12 505 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 RGMBQ6NW40 437 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 BHLHA9Q7RTU4 235 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 NPWQ8N729 165 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 ZNF669Q96BR6 464 aaPredicted RBP17.82■□□□□ 0.44
TRIM11-202ENST00000366699 SNX15Q9NRS6 342 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 DNAJC28Q9NX36 388 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 LRCH1Q9Y2L9 728 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 NUP205Q92621 2012 aa17.82■□□□□ 0.44
TRIM11-202ENST00000366699 SHROOM3Q8TF72 1996 aa17.81■□□□□ 0.44
TRIM11-202ENST00000366699 A6NHS1 94 aa17.81■□□□□ 0.44
TRIM11-202ENST00000366699 I6L893 689 aaPredicted RBP17.81■□□□□ 0.44
TRIM11-202ENST00000366699 LRIG2O94898 1065 aa17.81■□□□□ 0.44
TRIM11-202ENST00000366699 PRKCGP05129 697 aa17.81■□□□□ 0.44
TRIM11-202ENST00000366699 CPA3P15088 417 aa17.81■□□□□ 0.44
TRIM11-202ENST00000366699 BDNFP23560 247 aa17.81■□□□□ 0.44
TRIM11-202ENST00000366699 HTR7P34969 479 aa17.81■□□□□ 0.44
TRIM11-202ENST00000366699 MAGEA12P43365 314 aa17.81■□□□□ 0.44
TRIM11-202ENST00000366699 SERPINB8P50452 374 aa17.81■□□□□ 0.44
TRIM11-202ENST00000366699 ABCE1P61221 599 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms