RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 NPAS3Q8IXF0 933 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 NKD2Q969F2 451 aaPredicted RBP12.54□□□□□ -0.4
CAPN9-203ENST00000366666 RSPRY1Q96DX4 576 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 S1PR5Q9H228 398 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 TDP1Q9NUW8 608 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 DZANK1Q9NVP4 752 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 ARHGAP26Q9UNA1 814 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 ZFP37Q9Y6Q3 630 aaPredicted RBP12.54□□□□□ -0.4
CAPN9-203ENST00000366666 DRGXA6NNA5 263 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 FGF19O95750 216 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 VAV1P15498 845 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 RBL1P28749 1068 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 HSD17B3P37058 310 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 SLC11A2P49281 568 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 VPS41P49754 854 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 ACTN3Q08043 901 aaPredicted RBP12.54□□□□□ -0.4
CAPN9-203ENST00000366666 HLTFQ14527 1009 aaKnown RBP eCLIP12.54□□□□□ -0.4
CAPN9-203ENST00000366666 ARHGAP15Q53QZ3 475 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 ELMSAN1Q6PJG2 1045 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 C6orf89Q6UWU4 347 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 LEMD2Q8NC56 503 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 ZSCAN18Q8TBC5 510 aaPredicted RBP12.54□□□□□ -0.4
CAPN9-203ENST00000366666 FGF13Q92913 245 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 ZYG11BQ9C0D3 744 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 ACTR5Q9H9F9 607 aaPredicted RBP12.54□□□□□ -0.4
CAPN9-203ENST00000366666 NFS1Q9Y697 457 aa12.54□□□□□ -0.4
CAPN9-203ENST00000366666 GMNCA6NCL1 334 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 F5H5T6 163 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 H7C0C1 242 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 ZNF197O14709 1029 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 MCF2LO15068 1137 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 ECHS1P30084 290 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 VIPR2P41587 438 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 ATP5OP48047 213 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 DRICH1Q6PGQ1 229 aaPredicted RBP12.53□□□□□ -0.4
CAPN9-203ENST00000366666 HTR3DQ70Z44 454 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 TAB3Q8N5C8 712 aaPredicted RBP12.53□□□□□ -0.4
CAPN9-203ENST00000366666 RTL3Q8N8U3 475 aaKnown RBP12.53□□□□□ -0.4
CAPN9-203ENST00000366666 FAM71DQ8N9W8 422 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 TTC13Q8NBP0 860 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 ATL2Q8NHH9 583 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 GIMAP7Q8NHV1 300 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 MIEF2Q96C03 454 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 CEP41Q9BYV8 373 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 SLC39A8Q9C0K1 460 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 DPH5Q9H2P9 285 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 LINC00597Q9H2U6 94 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 ADAM7Q9H2U9 754 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 USP29Q9HBJ7 922 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 PLK2Q9NYY3 685 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 MCM8Q9UJA3 840 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 STOML2Q9UJZ1 356 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 DENND4AQ7Z401 1863 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 SGK1O00141 431 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 ECEL1O95672 775 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 ITGAVP06756 1048 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 ZFXP17010 805 aaPredicted RBP12.53□□□□□ -0.4
CAPN9-203ENST00000366666 FSHRP23945 695 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 DDX6P26196 483 aaKnown RBP eCLIP12.53□□□□□ -0.4
CAPN9-203ENST00000366666 SPDYCQ5MJ68 293 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 DARS2Q6PI48 645 aaKnown RBP12.53□□□□□ -0.4
CAPN9-203ENST00000366666 ALLCQ8N6M5 410 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 CCDC26Q8TAB7 109 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 AZIN2Q96A70 460 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 HOMER3Q9NSC5 361 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 LMCD1Q9NZU5 365 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 PPARGC1AQ9UBK2 798 aaKnown RBP12.53□□□□□ -0.4
CAPN9-203ENST00000366666 SH3BP1Q9Y3L3 701 aa12.53□□□□□ -0.4
CAPN9-203ENST00000366666 E7EVH7 732 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 DFFAO00273 331 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 GFRA2O00451 464 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 IFNB1P01574 187 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 IRX1P78414 480 aaPredicted RBP12.52□□□□□ -0.4
CAPN9-203ENST00000366666 DHX34Q14147 1143 aaKnown RBP12.52□□□□□ -0.4
CAPN9-203ENST00000366666 ZNF77Q15935 545 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 C5orf22Q49AR2 442 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 FAM78AQ5JUQ0 283 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 TPGS1Q6ZTW0 290 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 GSTA5Q7RTV2 222 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 WFDC5Q8TCV5 224 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 SLCO2A1Q92959 643 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 ZNF419Q96HQ0 510 aaPredicted RBP12.52□□□□□ -0.4
CAPN9-203ENST00000366666 CATSPERBQ9H7T0 1116 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 TMEM248Q9NWD8 314 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 CLEC4EQ9ULY5 219 aa12.52□□□□□ -0.4
CAPN9-203ENST00000366666 DRG1Q9Y295 367 aaKnown RBP12.52□□□□□ -0.4
CAPN9-203ENST00000366666 CLUHO75153 1309 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 A0A0D9SEW6 157 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 TP73O15350 636 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 FGF10O15520 208 aaPredicted RBP12.52□□□□□ -0.41
CAPN9-203ENST00000366666 KCNN4O15554 427 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 RHOQP17081 205 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 RPL21P46778 160 aaKnown RBP12.52□□□□□ -0.41
CAPN9-203ENST00000366666 NR2C2P49116 596 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 ZNF135P52742 658 aaPredicted RBP12.52□□□□□ -0.41
CAPN9-203ENST00000366666 SEC24CP53992 1094 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 ZNF844Q08AG5 666 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 PPP1R7Q15435 360 aa12.52□□□□□ -0.41
CAPN9-203ENST00000366666 CCDC85BQ15834 202 aaPredicted RBP12.52□□□□□ -0.41
CAPN9-203ENST00000366666 UAP1Q16222 522 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms