RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ARHGEF35A5YM69 484 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 LRRC14BA6NHZ5 514 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 INO80B-WBP1J3KQ70 363 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 POLR2DO15514 142 aaKnown RBP8.41□□□□□ -1.06
YBX3-204ENST00000366290 FGF18O76093 207 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 ERLIN2O94905 339 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 ARF4P18085 180 aaPredicted RBP8.41□□□□□ -1.06
YBX3-204ENST00000366290 DDCP20711 480 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 HTR1BP28222 390 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 PPM1AP35813 382 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 IL12RB1P42701 662 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 NAMPTP43490 491 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 EFNA5P52803 228 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 NCBP1Q09161 790 aaKnown RBP8.41□□□□□ -1.06
YBX3-204ENST00000366290 MAPK7Q13164 816 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 RAB39AQ14964 217 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 LEXMQ3ZCV2 418 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 TCEAL5Q5H9L2 206 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 RRAGBQ5VZM2 374 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 RINT1Q6NUQ1 792 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 C1orf186Q6ZWK4 172 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 ZNF572Q7Z3I7 529 aaPredicted RBP8.41□□□□□ -1.06
YBX3-204ENST00000366290 DAW1Q8N136 415 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 ENGASEQ8NFI3 743 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 IFI44Q8TCB0 444 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 POF1BQ8WVV4 589 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 STON2Q8WXE9 905 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 MRPS27Q92552 414 aaKnown RBP8.41□□□□□ -1.06
YBX3-204ENST00000366290 LARP4BQ92615 738 aaKnown RBP8.41□□□□□ -1.06
YBX3-204ENST00000366290 PGBD4Q96DM1 585 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 CDK5RAP3Q96JB5 506 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 KCNC2Q96PR1 638 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 LRRC37BQ96QE4 947 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 NTPCRQ9BSD7 190 aaKnown RBP8.41□□□□□ -1.06
YBX3-204ENST00000366290 TIPINQ9BVW5 301 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 C2orf40Q9H1Z8 148 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 UBE2ZQ9H832 354 aaPredicted RBP8.41□□□□□ -1.06
YBX3-204ENST00000366290 C17orf75Q9HAS0 396 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 POLD4Q9HCU8 107 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 MAN1C1Q9NR34 630 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 LMBRD1Q9NUN5 540 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 TBC1D13Q9NVG8 400 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 PRMT7Q9NVM4 692 aaPredicted RBP8.41□□□□□ -1.06
YBX3-204ENST00000366290 KCND2Q9NZV8 630 aa8.41□□□□□ -1.06
YBX3-204ENST00000366290 PHLPP2Q6ZVD8 1323 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 A0A1W2PRX2 142 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 UBE2QL1A1L167 161 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 FSD2A1L4K1 749 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 MYMKA6NI61 221 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 FAM227AF5H4B4 570 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 ACKR2O00590 384 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 CDC14BO60729 498 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 IL9P15248 144 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 CR2P20023 1033 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 FPR1P21462 350 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 PCSK1P29120 753 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 STAT6P42226 847 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 ALDH7A1P49419 539 aaKnown RBP8.4□□□□□ -1.06
YBX3-204ENST00000366290 GZMKP49863 264 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 APBA1Q02410 837 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 HYAL1Q12794 435 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 MTM1Q13496 603 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 LLGL1Q15334 1064 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 SURF1Q15526 300 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 LONRF3Q496Y0 759 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 CCDC157Q569K6 752 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 NOMO2Q5JPE7 1267 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 TMEM31Q5JXX7 168 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 SLC27A1Q6PCB7 646 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 CCDC73Q6ZRK6 1079 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 GPR135Q8IZ08 494 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 SLC39A11Q8N1S5 342 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 C3orf20Q8ND61 904 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 CASKIN2Q8WXE0 1202 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 TTC17Q96AE7 1141 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 DHX58Q96C10 678 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 ZNF558Q96NG5 402 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 LMF1Q96S06 567 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 VRK1Q99986 396 aaPredicted RBP8.4□□□□□ -1.06
YBX3-204ENST00000366290 SARGQ9BW04 601 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 B3GNT5Q9BYG0 378 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 RSAD1Q9HA92 442 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 MSL2Q9HCI7 577 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 SPG21Q9NZD8 308 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 POLHQ9Y253 713 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 TRIP11Q15643 1979 aa8.4□□□□□ -1.06
YBX3-204ENST00000366290 LRRIQ4A6NIV6 560 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 TPP1O14773 563 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 B4GALT5O43286 388 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 LAMTOR5O43504 91 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 ZNF202O95125 648 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 GALTP07902 379 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 SYKP43405 635 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 HK3P52790 923 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 KRT17Q04695 432 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 DSC1Q08554 894 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 SP140Q13342 867 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 KCNC3Q14003 757 aa8.39□□□□□ -1.07
YBX3-204ENST00000366290 DHX8Q14562 1220 aaKnown RBP8.39□□□□□ -1.07
YBX3-204ENST00000366290 MAPK6Q16659 721 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms