RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TNFRSF13BO14836 293 aaPredicted RBP4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 OAZ2O95190 189 aa4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 PKMP14618 531 aaKnown RBP4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 CHRNA5P30532 468 aa4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 POLE2P56282 527 aa4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 DCTN1Q14203 1278 aa4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 TBRG1Q3YBR2 411 aa4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 TRAPPC11Q7Z392 1133 aa4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 KDELC2Q7Z4H8 507 aa4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 HERC2P3Q9BVR0 1158 aa4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 POLDIP3Q9BY77 421 aaKnown RBP4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 ISCUQ9H1K1 167 aa4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 SIRT3Q9NTG7 399 aaPredicted RBP4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 TMEM248Q9NWD8 314 aa4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 PLEKHB1Q9UF11 243 aaPredicted RBP4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 SRP68Q9UHB9 627 aaKnown RBP4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 BAG5Q9UL15 447 aa4.98□□□□□ -1.61
RNU4-28P-201ENST00000364739 E7EVH7 732 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 IFNA2P01563 188 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 CHN1P15882 459 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 HOXB9P17482 250 aaPredicted RBP4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 TYK2P29597 1187 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 AVPR2P30518 371 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 CDKN2AP42771 156 aaKnown RBP4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 CUL4BQ13620 913 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 ALG10Q5BKT4 473 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 ALG10BQ5I7T1 473 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 DGAT2L7PQ6IED9 249 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 SLC16A12Q6ZSM3 486 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 FAM217AQ8IXS0 508 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 MYCT1Q8N699 235 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 ENDOVQ8N8Q3 282 aaKnown RBP4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 SLC2A12Q8TD20 617 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 OIT3Q8WWZ8 545 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 RUBCNQ92622 972 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 LPAR1Q92633 364 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 PIGSQ96S52 555 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 NPAS1Q99742 590 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 DDX23Q9BUQ8 820 aaKnown RBP4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 MRPL44Q9H9J2 332 aaKnown RBP4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 PLEKHA2Q9HB19 425 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 Q9N2J8 555 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 NDUFAF4Q9P032 175 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 TBC1D14Q9P2M4 693 aa4.97□□□□□ -1.61
RNU4-28P-201ENST00000364739 TRBV5-7A0A0A0MS05 114 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 BECN2A8MW95 431 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 MDM4O15151 490 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 ACP5P13686 325 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 VEGFAP15692 232 aaPredicted RBP4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 TKTP29401 623 aaKnown RBP4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 ARRB2P32121 409 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 SLC16A2P36021 539 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 RFX5P48382 616 aaPredicted RBP4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 TRAPPC10P48553 1259 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 THBS3P49746 956 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 CDK7P50613 346 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 CYP2J2P51589 502 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 ALKBH1Q13686 389 aaKnown RBP4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 RAPGEF1Q13905 1077 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 SEMA3AQ14563 771 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 TANGO2Q6ICL3 276 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 AAGABQ6PD74 315 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 SLC25A41Q8N5S1 370 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 LRRC57Q8N9N7 239 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 GOLGA1Q92805 767 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 RILPL2Q969X0 211 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 HIPK3Q9H422 1215 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 TLR8Q9NR97 1041 aaKnown RBP4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 KLQ9UEF7 1012 aa4.96□□□□□ -1.62
RNU4-28P-201ENST00000364739 IGKV2D-30A0A075B6S6 120 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 RPS10-NUDT3A0A1W2PQS6 291 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 IKBKBO14920 756 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 SYN3O14994 580 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 FCGR2AP12318 317 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 TBXAS1P24557 533 aaPredicted RBP4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 GSTM2P28161 218 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 CCKARP32238 428 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 TNFSF8P32971 234 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 STAT1P42224 750 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 RBM5P52756 815 aaKnown RBP eCLIP4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 TRAF1Q13077 416 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 POSTNQ15063 836 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 Q6ZTK2 550 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 SCN4BQ8IWT1 228 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 C7orf57Q8NEG2 295 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 ENGASEQ8NFI3 743 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 B4GALNT2Q8NHY0 566 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 ADAMTS15Q8TE58 950 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 URB1-AS1Q96HZ7 61 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 RBM38Q9H0Z9 239 aaKnown RBP4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 PNRC2Q9NPJ4 139 aaKnown RBP4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 SLC22A11Q9NSA0 550 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 RIPOR2Q9Y4F9 1068 aa4.95□□□□□ -1.62
RNU4-28P-201ENST00000364739 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 SMAD6O43541 496 aaKnown RBP4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 CSF1P09603 554 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 CST5P28325 142 aaPredicted RBP4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 FOXO1Q12778 655 aa4.94□□□□□ -1.62
RNU4-28P-201ENST00000364739 PLK5Q496M5 336 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms