RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SLC45A4Q5BKX6 768 aa21.15■□□□□ 0.98
SHISA4-201ENST00000362011 MPP7Q5T2T1 576 aa21.15■□□□□ 0.98
SHISA4-201ENST00000362011 AFMIDQ63HM1 303 aa21.15■□□□□ 0.98
SHISA4-201ENST00000362011 TANGO2Q6ICL3 276 aa21.15■□□□□ 0.98
SHISA4-201ENST00000362011 TPGS1Q6ZTW0 290 aa21.15■□□□□ 0.98
SHISA4-201ENST00000362011 OTOP3Q7RTS5 596 aa21.15■□□□□ 0.98
SHISA4-201ENST00000362011 MAATS1Q7Z4T9 603 aa21.15■□□□□ 0.98
SHISA4-201ENST00000362011 NETO2Q8NC67 525 aa21.15■□□□□ 0.98
SHISA4-201ENST00000362011 HDAC11Q96DB2 347 aa21.15■□□□□ 0.98
SHISA4-201ENST00000362011 LRRC3BQ96PB8 259 aa21.15■□□□□ 0.98
SHISA4-201ENST00000362011 QKIQ96PU8 341 aaKnown RBP eCLIP21.15■□□□□ 0.98
SHISA4-201ENST00000362011 SLC39A8Q9C0K1 460 aa21.15■□□□□ 0.98
SHISA4-201ENST00000362011 THG1LQ9NWX6 298 aaKnown RBP21.15■□□□□ 0.98
SHISA4-201ENST00000362011 DUS2Q9NX74 493 aaKnown RBP21.15■□□□□ 0.98
SHISA4-201ENST00000362011 COL4A3Q01955 1670 aa21.15■□□□□ 0.98
SHISA4-201ENST00000362011 CFAP69A5D8W1 941 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 H0Y858 1186 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 RAD51CO43502 376 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 LUC7L3O95232 432 aaKnown RBP21.14■□□□□ 0.97
SHISA4-201ENST00000362011 YBEYP58557 167 aaPredicted RBP21.14■□□□□ 0.97
SHISA4-201ENST00000362011 DR1Q01658 176 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 GLE1Q53GS7 698 aaKnown RBP21.14■□□□□ 0.97
SHISA4-201ENST00000362011 VITQ6UXI7 678 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 MTSS1LQ765P7 747 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 CCDC117Q8IWD4 279 aaPredicted RBP21.14■□□□□ 0.97
SHISA4-201ENST00000362011 TP53INP2Q8IXH6 220 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 CARNMT1Q8N4J0 409 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 CCDC33Q8N5R6 958 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 TMEM105Q8N8V8 129 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 OSCP1Q8WVF1 389 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 TFB1MQ8WVM0 346 aaKnown RBP21.14■□□□□ 0.97
SHISA4-201ENST00000362011 UBXN4Q92575 508 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 SLCO2A1Q92959 643 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 ELSPBP1Q96BH3 223 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 LRRC1Q9BTT6 524 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 BRD8Q9H0E9 1235 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 LINC00597Q9H2U6 94 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 NOL6Q9H6R4 1146 aaKnown RBP21.14■□□□□ 0.97
SHISA4-201ENST00000362011 SPHK2Q9NRA0 654 aa21.14■□□□□ 0.97
SHISA4-201ENST00000362011 ZFHX2Q9C0A1 2572 aaPredicted RBP21.14■□□□□ 0.97
SHISA4-201ENST00000362011 BCLAF3A2AJT9 711 aaKnown RBP21.13■□□□□ 0.97
SHISA4-201ENST00000362011 FAM187AA6NFU0 413 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 ARHGAP42A6NI28 874 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 H0Y626 953 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 SGK1O00141 431 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 DFFAO00273 331 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 RAMP2O60895 175 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 ZNF189O75820 626 aaPredicted RBP21.13■□□□□ 0.97
SHISA4-201ENST00000362011 ECEL1O95672 775 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 RHOCP08134 193 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 HOXD9P28356 352 aaPredicted RBP21.13■□□□□ 0.97
SHISA4-201ENST00000362011 GARSP41250 739 aaKnown RBP21.13■□□□□ 0.97
SHISA4-201ENST00000362011 NBL1P41271 181 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 PTGIRP43119 386 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 PARP15Q460N3 678 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 C6orf118Q5T5N4 469 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 GSTA5Q7RTV2 222 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 SETD3Q86TU7 594 aaPredicted RBP21.13■□□□□ 0.97
SHISA4-201ENST00000362011 ATPAF2Q8N5M1 289 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 CCNYQ8ND76 341 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 MYRIPQ8NFW9 859 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 RSAD2Q8WXG1 361 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 IRF7Q92985 503 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 TMEM121Q9BTD3 319 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 EPS15L1Q9UBC2 864 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 ANKRD36A6QL64 1941 aa21.13■□□□□ 0.97
SHISA4-201ENST00000362011 RASA4BC9J798 803 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 TTI1O43156 1089 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 RASA4O43374 803 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 GAS8O95995 478 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 PPIDQ08752 370 aaKnown RBP21.12■□□□□ 0.97
SHISA4-201ENST00000362011 CDH18Q13634 790 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 POLD3Q15054 466 aaPredicted RBP21.12■□□□□ 0.97
SHISA4-201ENST00000362011 PRKD1Q15139 912 aaPredicted RBP21.12■□□□□ 0.97
SHISA4-201ENST00000362011 EML3Q32P44 896 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 FYB2Q5VWT5 728 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 HEATR6Q6AI08 1181 aaKnown RBP21.12■□□□□ 0.97
SHISA4-201ENST00000362011 SYDE1Q6ZW31 735 aaPredicted RBP21.12■□□□□ 0.97
SHISA4-201ENST00000362011 B4GALNT4Q76KP1 1039 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 TMEM25Q86YD3 366 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 JAMLQ86YT9 394 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 LRRC49Q8IUZ0 686 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 MFN1Q8IWA4 741 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 MFSD6LQ8IWD5 586 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 YAF2Q8IY57 180 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 ADGRG2Q8IZP9 1017 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 PLCD3Q8N3E9 789 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 ALLCQ8N6M5 410 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 DEPDC1BQ8WUY9 529 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 BHMTQ93088 406 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 KXD1Q9BQD3 176 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 FERMT1Q9BQL6 677 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 BBS2Q9BXC9 721 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 MAGEH1Q9H213 219 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 C10orf88Q9H8K7 445 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 TBC1D30Q9Y2I9 924 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 MYO10Q9HD67 2058 aa21.12■□□□□ 0.97
SHISA4-201ENST00000362011 ILVBLA1L0T0 632 aa21.11■□□□□ 0.97
SHISA4-201ENST00000362011 KCNN4O15554 427 aa21.11■□□□□ 0.97
SHISA4-201ENST00000362011 ECI2O75521 394 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms