RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 GLIS1Q8NBF1 620 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 N4BP2L2Q92802 583 aaPredicted RBP13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 HAPLN3Q96S86 360 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 TMEM121Q9BTD3 319 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 C10orf88Q9H8K7 445 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 ETNK2Q9NVF9 386 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 ARHGEF38Q9NXL2 777 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 UXTQ9UBK9 157 aaPredicted RBP13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 OR12D3Q9UGF7 316 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 XPO7Q9UIA9 1087 aaKnown RBP13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 IRAK3Q9Y616 596 aa13.5□□□□□ -0.25
SQSTM1-201ENST00000360718 TLR5O60602 858 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 MAP3K6O95382 1288 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 APOEP02649 317 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 KRT16P08779 473 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 CA4P22748 312 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 RASSF2P50749 326 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 KPNA1P52294 538 aaPredicted RBP13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 ARL4CP56559 192 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 TBX4P57082 545 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 GEMIN4P57678 1058 aaKnown RBP13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 UBE3AQ05086 875 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 SEMA3BQ13214 749 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 SEPT7Q16181 437 aaKnown RBP13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 HIF1AQ16665 826 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 ARTNQ5T4W7 220 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 RFX8Q6ZV50 586 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 ITIH5Q86UX2 942 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 PPIL6Q8IXY8 311 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 TRMT2BQ96GJ1 504 aaKnown RBP13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 MYRFLQ96LU7 910 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 LRRC37BQ96QE4 947 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 NACA2Q9H009 215 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 OSBPL2Q9H1P3 480 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 CERS4Q9HA82 394 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 ARHGEF4Q9NR80 690 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 TLR9Q9NR96 1032 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 TRPM5Q9NZQ8 1165 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 MARCH2Q9P0N8 246 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 STK38LQ9Y2H1 464 aa13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 MYO18AQ92614 2054 aaKnown RBP13.49□□□□□ -0.25
SQSTM1-201ENST00000360718 ZWINTO95229 277 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 IFNB1P01574 187 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 ETS1P14921 441 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 STIP1P31948 543 aaKnown RBP13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 PPP3CCP48454 512 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 DNAJC3Q13217 504 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 CCDC149Q6ZUS6 474 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 TMEM150AQ86TG1 271 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 ZC3H18Q86VM9 953 aaKnown RBP13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 AGGF1Q8N302 714 aaeCLIP13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 ZNF276Q8N554 614 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 AGAP11Q8TF27 550 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 PYROXD1Q8WU10 500 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 SIK2Q9H0K1 926 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 ETNK1Q9HBU6 452 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 ZNF334Q9HCZ1 680 aaPredicted RBP13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 NRG2O14511 850 aaPredicted RBP13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 EDF1O60869 148 aaKnown RBP13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 WFS1O76024 890 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 ANP32DO95626 131 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 RB1P06400 928 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 HTR7P34969 479 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 MGAT5Q09328 741 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 MTA1Q13330 715 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 TRIP4Q15650 581 aaPredicted RBP13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 PARP6Q2NL67 630 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 KLHL38Q2WGJ6 581 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 DNAJB7Q7Z6W7 309 aaPredicted RBP13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 MIB1Q86YT6 1006 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 ATP6V0D2Q8N8Y2 350 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 ATP11CQ8NB49 1132 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 NETO2Q8NC67 525 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 MICAL1Q8TDZ2 1067 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 LRRN4Q8WUT4 740 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 PRCCQ92733 491 aaPredicted RBP13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 SLC39A13Q96H72 371 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 GDF15Q99988 308 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 FERMT1Q9BQL6 677 aa13.48□□□□□ -0.25
SQSTM1-201ENST00000360718 PDE4DIPQ5VU43 2346 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 CFAP69A5D8W1 941 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 ZNF840PA6NDX5 716 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 PAGE1O75459 146 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 MOCS2O96007 188 aaPredicted RBP13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 LRG1P02750 347 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 TSHRP16473 764 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 ATP5C1P36542 298 aaKnown RBP13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 SLC10A2Q12908 348 aaPredicted RBP13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 DPYSQ14117 519 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 SPDYAQ5MJ70 313 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 HECTD3Q5T447 861 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 SNX30Q5VWJ9 437 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 FYB2Q5VWT5 728 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 NCBP2-AS2Q69YL0 99 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 TLDC1Q6P9B6 456 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 CDKL3Q8IVW4 592 aaPredicted RBP13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 KIF2BQ8N4N8 673 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 CCDC33Q8N5R6 958 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 INPP5DQ92835 1189 aa13.47□□□□□ -0.25
SQSTM1-201ENST00000360718 ALKBH8Q96BT7 664 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms