RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 A0A0A0MRY4 1105 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 A0A0D9SEW6 157 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 RASA4BC9J798 803 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 APOC4-APOC2K7ER74 178 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 TRIM24O15164 1050 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 RASA4O43374 803 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 MFSD11O43934 449 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 APOC2P02655 101 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 MZF1P28698 734 aaPredicted RBP12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 CTHP32929 405 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 CD70P32970 193 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 SOX9P48436 509 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 DGKGP49619 791 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 POLD3Q15054 466 aaPredicted RBP12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 SIX1Q15475 284 aaPredicted RBP12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 LONRF2Q1L5Z9 754 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 PARP15Q460N3 678 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 SLC44A4Q53GD3 710 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 IER5LQ5T953 404 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 RNF219Q5W0B1 726 aaPredicted RBP12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 C1orf228Q6PIY5 440 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 NPNTQ6UXI9 565 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 RALGPS2Q86X27 583 aaPredicted RBP12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 TP53INP2Q8IXH6 220 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 PHTF2Q8N3S3 785 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 ARHGEF2Q92974 986 aaKnown RBP12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 MSANTD3Q96H12 275 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 CELF6Q96J87 481 aaKnown RBP12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 FEM1AQ9BSK4 669 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 ACE2Q9BYF1 805 aaPredicted RBP12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 HEBP1Q9NRV9 189 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 ABCB8Q9NUT2 735 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 INTS6Q9UL03 887 aaKnown RBP12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 COL4A3Q01955 1670 aa12.71□□□□□ -0.37
NIF3L1-201ENST00000359683 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 SPECC1L-ADORA2AF8WAN1 911 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 PABPC1P11940 636 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 PECAM1P16284 738 aaPredicted RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 ACVRL1P37023 503 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 ETFBP38117 255 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 CSKP41240 450 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 GALK1P51570 392 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 GALNT2Q10471 571 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 DMC1Q14565 340 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 NAIF1Q69YI7 327 aaPredicted RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 GRAMD4Q6IC98 578 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 BZW1Q7L1Q6 419 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 LRRC49Q8IUZ0 686 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 TTC13Q8NBP0 860 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 NETO2Q8NC67 525 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 OR7D4Q8NG98 312 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 MAIP1Q8WWC4 291 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 P3H4Q92791 437 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 HMCESQ96FZ2 354 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 OLFM3Q96PB7 478 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 PNKPQ96T60 521 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 NAP1L3Q99457 506 aaPredicted RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 SAE1Q9UBE0 346 aaPredicted RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 WNT16Q9UBV4 365 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 GGA2Q9UJY4 613 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 HEY1Q9Y5J3 304 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 PIAS3Q9Y6X2 628 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 F5P12259 2224 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 ARHGAP42A6NI28 874 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 SHISA7A6NL88 538 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 PGRMC1O00264 195 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 NCAM2O15394 837 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 URI1O94763 535 aaPredicted RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 MX2P20592 715 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 PAPOLAP51003 745 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 MESP2Q0VG99 397 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 SERINC3Q13530 473 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 TUBB2AQ13885 445 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 NOMO1Q15155 1222 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 GEN1Q17RS7 908 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 PLEKHG6Q3KR16 790 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 PREPLQ4J6C6 727 aaPredicted RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 CCDC181Q5TID7 509 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 TXNDC11Q6PKC3 985 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 ADAT2Q7Z6V5 191 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 ADIPOR2Q86V24 386 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 SUGP1Q8IWZ8 645 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 UBALD2Q8IYN6 164 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 APCDD1Q8J025 514 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 ACTL9Q8TC94 416 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 WFIKKN2Q8TEU8 576 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 EDAQ92838 391 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 TTC17Q96AE7 1141 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 TSGA13Q96PP4 275 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 TUBB2BQ9BVA1 445 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 MUC3BQ9H195 1237 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 FBRSL1Q9HCM7 1045 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 CDC23Q9UJX2 597 aa12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 R3HDM2Q9Y2K5 976 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-201ENST00000359683 PDE2AO00408 941 aaPredicted RBP12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 KDELR3O43731 214 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 ZMPSTE24O75844 475 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 MAP3K6O95382 1288 aa12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 GARSP41250 739 aaKnown RBP12.69□□□□□ -0.38
NIF3L1-201ENST00000359683 GRIA2P42262 883 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms