RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 COQ6Q9Y2Z9 468 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 PNPLA7Q6ZV29 1317 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 DHPSP49366 369 aaPredicted RBP7.48□□□□□ -1.21
VPS13A-202ENST00000357409 KCTD21Q4G0X4 260 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 PCNX4Q63HM2 1172 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 ZNF57Q68EA5 555 aaPredicted RBP7.48□□□□□ -1.21
VPS13A-202ENST00000357409 SLC27A1Q6PCB7 646 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 SGMS1Q86VZ5 419 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 SETD6Q8TBK2 473 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 NMD3Q96D46 503 aaKnown RBP7.48□□□□□ -1.21
VPS13A-202ENST00000357409 CHST7Q9NS84 486 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 ANKEF1Q9NU02 776 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 RHBDL2Q9NX52 303 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 TMCC3Q9ULS5 477 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 OR56A5P0C7T3 313 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 ITGALP20701 1170 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 CCNOP22674 350 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 SPIDRQ14159 915 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 FBXO15Q8NCQ5 510 aaPredicted RBP7.48□□□□□ -1.21
VPS13A-202ENST00000357409 ADCY4Q8NFM4 1077 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 RIBC2Q9H4K1 309 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 ALG9Q9H6U8 611 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 GRID2IPA4D2P6 1211 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 DLGAP3O95886 979 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 RPS12P25398 132 aaKnown RBP7.48□□□□□ -1.21
VPS13A-202ENST00000357409 ACAP1Q15027 740 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 KYAT1Q16773 422 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 EEF1DP3Q658K8 133 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 SLC25A24Q6NUK1 477 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 PPP1R2P3Q6NXS1 205 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 C11orf88Q6PI97 169 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 CYB5D2Q8WUJ1 264 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 SPRTNQ9H040 489 aaPredicted RBP7.48□□□□□ -1.21
VPS13A-202ENST00000357409 VTA1Q9NP79 307 aa7.48□□□□□ -1.21
VPS13A-202ENST00000357409 A0A1W2PQH9 124 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 FAM20BO75063 409 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 TIPRLO75663 272 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 CYP2A7P20853 494 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 PNPLA4P41247 253 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 ACAP2Q15057 778 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 KCNT2Q6UVM3 1135 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 GALNTL5Q7Z4T8 443 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 GORASP1Q9BQQ3 440 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 TUBGCP4Q9UGJ1 667 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 DCLK1O15075 740 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 TLR5O60602 858 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 LGR5O75473 907 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 ATP5BP06576 529 aaKnown RBP7.47□□□□□ -1.21
VPS13A-202ENST00000357409 TFPIP10646 304 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 EIF4BP23588 611 aaKnown RBP7.47□□□□□ -1.21
VPS13A-202ENST00000357409 GATMP50440 423 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 CDC42EP1Q00587 391 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 MTAPQ13126 283 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 TIGD7Q6NT04 549 aaPredicted RBP7.47□□□□□ -1.21
VPS13A-202ENST00000357409 CRTC1Q6UUV9 634 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 PROSER1Q86XN7 944 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 CDK20Q8IZL9 346 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 IL31RAQ8NI17 732 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 FBXO25Q8TCJ0 367 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 ANKS1AQ92625 1134 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 ILKAPQ9H0C8 392 aaPredicted RBP7.47□□□□□ -1.21
VPS13A-202ENST00000357409 SEMA4AQ9H3S1 761 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 CAB39LQ9H9S4 337 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 EFCAB6Q5THR3 1501 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 SIN3BO75182 1162 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 SLC20A2Q08357 652 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 PKN2Q16513 984 aaKnown RBP7.47□□□□□ -1.21
VPS13A-202ENST00000357409 PFKFB4Q16877 469 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 NLGN4YQ8NFZ3 816 aaPredicted RBP7.47□□□□□ -1.21
VPS13A-202ENST00000357409 SELENOMQ8WWX9 145 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 KAZALD1Q96I82 304 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 RNF145Q96MT1 663 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 ERP44Q9BS26 406 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 MECRQ9BV79 373 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 ALDH8A1Q9H2A2 487 aaPredicted RBP7.47□□□□□ -1.21
VPS13A-202ENST00000357409 DPEP3Q9H4B8 488 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 SPATA31A6Q5VVP1 1343 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 OR2AG2A6NM03 316 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 LDB2O43679 373 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 HS6ST1O60243 411 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 SERPINF2P08697 491 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 CPA3P15088 417 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 GOT1P17174 413 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 SEPHS1P49903 392 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 SMAD3P84022 425 aaKnown RBP7.47□□□□□ -1.21
VPS13A-202ENST00000357409 HPS6Q86YV9 775 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 BHLHE41Q9C0J9 482 aaPredicted RBP7.47□□□□□ -1.21
VPS13A-202ENST00000357409 RIC8BQ9NVN3 520 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 TMEM88BA6NKF7 163 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 A8MUI8 341 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 SLC25A14O95258 325 aaPredicted RBP7.47□□□□□ -1.21
VPS13A-202ENST00000357409 NR4A1P22736 598 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 MIPP30301 263 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 HSD17B3P37058 310 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 ELK3P41970 407 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 RFX5P48382 616 aaPredicted RBP7.47□□□□□ -1.21
VPS13A-202ENST00000357409 PXNP49023 591 aaPredicted RBP7.47□□□□□ -1.21
VPS13A-202ENST00000357409 UGCGQ16739 394 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 DACT2Q5SW24 774 aa7.47□□□□□ -1.21
VPS13A-202ENST00000357409 HDDC2Q7Z4H3 204 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms