RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 GLOD4Q9HC38 313 aa17.6■□□□□ 0.41
VPS13B-201ENST00000355155 NDFIP2Q9NV92 336 aa17.6■□□□□ 0.41
VPS13B-201ENST00000355155 TRPM5Q9NZQ8 1165 aa17.6■□□□□ 0.41
VPS13B-201ENST00000355155 INSL5Q9Y5Q6 135 aa17.6■□□□□ 0.41
VPS13B-201ENST00000355155 KCNK1O00180 336 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 TYROBPO43914 113 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 CPP00450 1065 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 F11P03951 625 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 TACR2P21452 398 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 ADRA1AP35348 466 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 PRPSAP1Q14558 356 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 SPANXN3Q5MJ09 141 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 TIFABQ6ZNK6 161 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 CHST9Q7L1S5 443 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 TMEM150AQ86TG1 271 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 FAM217AQ8IXS0 508 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 CCDC33Q8N5R6 958 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 IGSF8Q969P0 613 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 SGSM3Q96HU1 749 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 ZNF599Q96NL3 588 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 ZNF317Q96PQ6 595 aaPredicted RBP17.59■□□□□ 0.41
VPS13B-201ENST00000355155 MRM3Q9HC36 420 aaKnown RBP17.59■□□□□ 0.41
VPS13B-201ENST00000355155 SHROOM3Q8TF72 1996 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 MTCL1Q9Y4B5 1905 aaKnown RBP17.59■□□□□ 0.41
VPS13B-201ENST00000355155 ARHGAP42A6NI28 874 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 FGBP02675 491 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 PAPOLAP51003 745 aaKnown RBP17.59■□□□□ 0.41
VPS13B-201ENST00000355155 SLC18A2Q05940 514 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 VEPH1Q14D04 833 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 FAM133BQ5BKY9 247 aaKnown RBP17.59■□□□□ 0.41
VPS13B-201ENST00000355155 SPOUT1Q5T280 376 aaKnown RBP17.59■□□□□ 0.41
VPS13B-201ENST00000355155 ALG1LQ6GMV1 187 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 PSRC1Q6PGN9 363 aaPredicted RBP17.59■□□□□ 0.41
VPS13B-201ENST00000355155 TMEM135Q86UB9 458 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 SLC26A11Q86WA9 606 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 OXNAD1Q96HP4 312 aaPredicted RBP17.59■□□□□ 0.41
VPS13B-201ENST00000355155 YME1L1Q96TA2 773 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 ATP13A1Q9HD20 1204 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 INSL6Q9Y581 213 aa17.59■□□□□ 0.41
VPS13B-201ENST00000355155 HELZP42694 1942 aaKnown RBP17.59■□□□□ 0.41
VPS13B-201ENST00000355155 SMIM23A6NLE4 172 aa17.58■□□□□ 0.41
VPS13B-201ENST00000355155 COCHO43405 550 aa17.58■□□□□ 0.41
VPS13B-201ENST00000355155 NFKB1P19838 968 aa17.58■□□□□ 0.41
VPS13B-201ENST00000355155 CNTFP26441 200 aa17.58■□□□□ 0.41
VPS13B-201ENST00000355155 GRIA1P42261 906 aa17.58■□□□□ 0.41
VPS13B-201ENST00000355155 MSH2P43246 934 aa17.58■□□□□ 0.41
VPS13B-201ENST00000355155 IL10RBQ08334 325 aa17.58■□□□□ 0.41
VPS13B-201ENST00000355155 HP1BP3Q5SSJ5 553 aaPredicted RBP17.58■□□□□ 0.41
VPS13B-201ENST00000355155 RGS9BPQ6ZS82 235 aa17.58■□□□□ 0.41
VPS13B-201ENST00000355155 ITIH5Q86UX2 942 aa17.58■□□□□ 0.41
VPS13B-201ENST00000355155 MPP5Q8N3R9 675 aa17.58■□□□□ 0.41
VPS13B-201ENST00000355155 FIBCD1Q8N539 461 aa17.58■□□□□ 0.41
VPS13B-201ENST00000355155 TAB3Q8N5C8 712 aaPredicted RBP17.58■□□□□ 0.41
VPS13B-201ENST00000355155 GMNCA6NCL1 334 aa17.58■□□□□ 0.4
VPS13B-201ENST00000355155 H3BNC9 293 aa17.58■□□□□ 0.4
VPS13B-201ENST00000355155 ANXA9O76027 345 aa17.58■□□□□ 0.4
VPS13B-201ENST00000355155 FGF18O76093 207 aa17.58■□□□□ 0.4
VPS13B-201ENST00000355155 FAM107AO95990 144 aa17.58■□□□□ 0.4
VPS13B-201ENST00000355155 TMEM240Q5SV17 173 aa17.58■□□□□ 0.4
VPS13B-201ENST00000355155 TTC39BQ5VTQ0 682 aaPredicted RBP17.58■□□□□ 0.4
VPS13B-201ENST00000355155 ARHGAP36Q6ZRI8 547 aa17.58■□□□□ 0.4
VPS13B-201ENST00000355155 MTBPQ96DY7 904 aa17.58■□□□□ 0.4
VPS13B-201ENST00000355155 ZNF419Q96HQ0 510 aaPredicted RBP17.58■□□□□ 0.4
VPS13B-201ENST00000355155 CELF6Q96J87 481 aaKnown RBP17.58■□□□□ 0.4
VPS13B-201ENST00000355155 LRRC3Q9BY71 257 aa17.58■□□□□ 0.4
VPS13B-201ENST00000355155 IL21Q9HBE4 155 aa17.58■□□□□ 0.4
VPS13B-201ENST00000355155 ARNT2Q9HBZ2 717 aa17.58■□□□□ 0.4
VPS13B-201ENST00000355155 IQANK1A0A1B0GTG1 560 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 TMEM120BA0PK00 339 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 BRAFP15056 766 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 CCNFP41002 786 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 FPGSQ05932 587 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 DNAJC3Q13217 504 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 EFTUD2Q15029 972 aaKnown RBP eCLIP17.57■□□□□ 0.4
VPS13B-201ENST00000355155 TMED2Q15363 201 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 KBTBD12Q3ZCT8 623 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 ALFQ53S48 1182 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 NAPEPLDQ6IQ20 393 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 PTCD2Q8WV60 388 aaKnown RBP17.57■□□□□ 0.4
VPS13B-201ENST00000355155 PDFQ9HBH1 243 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 CYP4F11Q9HBI6 524 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 PRDM10Q9NQV6 1147 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 SEPT10Q9P0V9 454 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 VANGL2Q9ULK5 521 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 RASA4BC9J798 803 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 RASA4O43374 803 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 USP1O94782 785 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 JCHAINP01591 159 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 ACRP10323 421 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 SERPINB9P50453 376 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 EPHB3P54753 998 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 GEMP55040 296 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 PRPF39Q86UA1 669 aaKnown RBP17.57■□□□□ 0.4
VPS13B-201ENST00000355155 NETO2Q8NC67 525 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 ZFRQ96KR1 1074 aaKnown RBP17.57■□□□□ 0.4
VPS13B-201ENST00000355155 INTS9Q9NV88 658 aaKnown RBP17.57■□□□□ 0.4
VPS13B-201ENST00000355155 MPP6Q9NZW5 540 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 IPO11Q9UI26 975 aaKnown RBP17.57■□□□□ 0.4
VPS13B-201ENST00000355155 FAM237BA0A1B0GVD1 139 aa17.57■□□□□ 0.4
VPS13B-201ENST00000355155 POC1B-GALNT4F8VUJ3 575 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms