RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 LILRB3O75022 631 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 CTSAP10619 480 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 ZFXP17010 805 aaPredicted RBP13.74□□□□□ -0.21
UBA3-201ENST00000349511 NUMBP49757 651 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 CLNS1AP54105 237 aaKnown RBP13.74□□□□□ -0.21
UBA3-201ENST00000349511 AIF1P55008 147 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 GAD2Q05329 585 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 AP1B1Q10567 949 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 FAXCQ5TGI0 409 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 TPGS2Q68CL5 300 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 C14orf80Q86SX3 495 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 NPWQ8N729 165 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 CCDC110Q8TBZ0 833 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 DEPDC1BQ8WUY9 529 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 RSRC1Q96IZ7 334 aaKnown RBP13.74□□□□□ -0.21
UBA3-201ENST00000349511 CELF6Q96J87 481 aaKnown RBP13.74□□□□□ -0.21
UBA3-201ENST00000349511 RAB3IPQ96QF0 476 aaPredicted RBP13.74□□□□□ -0.21
UBA3-201ENST00000349511 EPAS1Q99814 870 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 FRMD8P1Q9BZ68 369 aaPredicted RBP13.74□□□□□ -0.21
UBA3-201ENST00000349511 ENTPD7Q9NQZ7 604 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 MPP6Q9NZW5 540 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 RCOR3Q9P2K3 495 aaPredicted RBP13.74□□□□□ -0.21
UBA3-201ENST00000349511 RABGEF1Q9UJ41 708 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
UBA3-201ENST00000349511 HS3ST4Q9Y661 456 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 CLUHO75153 1309 aa13.74□□□□□ -0.21
UBA3-201ENST00000349511 ZNF487B1APH4 448 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 NDC80O14777 642 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 ATP5HO75947 161 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 GEMIN4P57678 1058 aaKnown RBP13.73□□□□□ -0.21
UBA3-201ENST00000349511 BASP1P80723 227 aaKnown RBP13.73□□□□□ -0.21
UBA3-201ENST00000349511 EFTUD2Q15029 972 aaKnown RBP eCLIP13.73□□□□□ -0.211e-10■■■■■ 73.3
UBA3-201ENST00000349511 RASA2Q15283 850 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 HIF1AQ16665 826 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 BRMS1LQ5PSV4 323 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 HHATQ5VTY9 493 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 LVRNQ6Q4G3 990 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 PCGF5Q86SE9 256 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 TTC16Q8NEE8 873 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 MICAL1Q8TDZ2 1067 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 POF1BQ8WVV4 589 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 LRRC37BQ96QE4 947 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 NACA2Q9H009 215 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 PPCSQ9HAB8 311 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 NDFIP2Q9NV92 336 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 CLIC5Q9NZA1 410 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 SEPT10Q9P0V9 454 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 TLR6Q9Y2C9 796 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 DOCK6Q96HP0 2047 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 EYSQ5T1H1 3165 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 TCRBV7S3A2A0A539 114 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 LINC01553A4QN01 128 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 KCNU1A8MYU2 1149 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 DIAPH2O60879 1101 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 VAV1P15498 845 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 TARSP26639 723 aaKnown RBP13.73□□□□□ -0.21
UBA3-201ENST00000349511 SSTR1P30872 391 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 BMPR1AP36894 532 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 KCNQ1P51787 676 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 FNBP1LQ5T0N5 605 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 PIK3R6Q5UE93 754 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 ANKRD22Q5VYY1 191 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 DNAJB7Q7Z6W7 309 aaPredicted RBP13.73□□□□□ -0.21
UBA3-201ENST00000349511 C10orf82Q8WW14 230 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 SLC39A13Q96H72 371 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 TMEM237Q96Q45 408 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 HTATIP2Q9BUP3 242 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 TTLL2Q9BWV7 592 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 UBE2OQ9C0C9 1292 aaKnown RBP13.73□□□□□ -0.21
UBA3-201ENST00000349511 LRMDAQ9H2I8 198 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 PRDM12Q9H4Q4 367 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 HAO1Q9UJM8 370 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 VANGL2Q9ULK5 521 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 INSL5Q9Y5Q6 135 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 UNC80Q8N2C7 3258 aa13.73□□□□□ -0.21
UBA3-201ENST00000349511 SHROOM3Q8TF72 1996 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 C2orf78A6NCI8 922 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 ZNF840PA6NDX5 716 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 SCAMP3O14828 347 aaKnown RBP13.72□□□□□ -0.21
UBA3-201ENST00000349511 DCTN3O75935 186 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 WFS1O76024 890 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 ZDHHC11BP0C7U3 371 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 CSH1P0DML2 217 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 CSH2P0DML3 217 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 KRT4P19013 534 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 STIP1P31948 543 aaKnown RBP13.72□□□□□ -0.21
UBA3-201ENST00000349511 NR2C2P49116 596 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 PSEN1P49768 467 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 PPP2R5DQ14738 602 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 PARP6Q2NL67 630 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 MSS51Q4VC12 460 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 MSANTD2Q6P1R3 559 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 OTOAQ7RTW8 1153 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 PPIL6Q8IXY8 311 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 NAT8LQ8N9F0 302 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 PYROXD1Q8WU10 500 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 CPT1BQ92523 772 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 ZNF75CPQ92670 426 aaPredicted RBP13.72□□□□□ -0.21
UBA3-201ENST00000349511 HAPLN3Q96S86 360 aa13.72□□□□□ -0.21
UBA3-201ENST00000349511 CERS4Q9HA82 394 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms