RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ARHGAP36Q6ZRI8 547 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 CDKL3Q8IVW4 592 aaPredicted RBP27.72■■■□□ 2.03
SSBP4-202ENST00000348495 YAF2Q8IY57 180 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 CCDC105Q8IYK2 499 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 ARHGEF2Q92974 986 aaKnown RBP27.72■■■□□ 2.03
SSBP4-202ENST00000348495 LMLNQ96KR4 655 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 PRUNE2Q8WUY3 3088 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 OTOL1A6NHN0 477 aaPredicted RBP27.72■■■□□ 2.03
SSBP4-202ENST00000348495 ARHGAP42A6NI28 874 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 EFCAB8A8MWE9 144 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 CHADO15335 359 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 ADH1CP00326 375 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 TRMT61BQ9BVS5 477 aaKnown RBP27.72■■■□□ 2.03
SSBP4-202ENST00000348495 FEZ2Q9UHY8 353 aaPredicted RBP27.72■■■□□ 2.03
SSBP4-202ENST00000348495 NEU2Q9Y3R4 380 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 OR51B4Q9Y5P0 310 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 ARNTLO00327 626 aa27.71■■■□□ 2.03
SSBP4-202ENST00000348495 MAFKO60675 156 aa27.71■■■□□ 2.03
SSBP4-202ENST00000348495 ADH5P11766 374 aa27.71■■■□□ 2.03
SSBP4-202ENST00000348495 ACVRL1P37023 503 aa27.71■■■□□ 2.03
SSBP4-202ENST00000348495 DR1Q01658 176 aa27.71■■■□□ 2.03
SSBP4-202ENST00000348495 TNK2Q07912 1038 aa27.71■■■□□ 2.03
SSBP4-202ENST00000348495 SERINC3Q13530 473 aa27.71■■■□□ 2.03
SSBP4-202ENST00000348495 DHX34Q14147 1143 aaKnown RBP27.71■■■□□ 2.03
SSBP4-202ENST00000348495 GAB4Q2WGN9 574 aa27.71■■■□□ 2.03
SSBP4-202ENST00000348495 PLCD3Q8N3E9 789 aa27.71■■■□□ 2.03
SSBP4-202ENST00000348495 ALLCQ8N6M5 410 aa27.71■■■□□ 2.03
SSBP4-202ENST00000348495 ALG14Q96F25 216 aa27.71■■■□□ 2.03
SSBP4-202ENST00000348495 ECT2Q9H8V3 914 aa27.71■■■□□ 2.03
SSBP4-202ENST00000348495 VAV1P15498 845 aa27.7■■■□□ 2.03
SSBP4-202ENST00000348495 RBL1P28749 1068 aa27.7■■■□□ 2.03
SSBP4-202ENST00000348495 LMNB2Q03252 620 aa27.7■■■□□ 2.03
SSBP4-202ENST00000348495 TFF2Q03403 129 aa27.7■■■□□ 2.03
SSBP4-202ENST00000348495 GAD2Q05329 585 aa27.7■■■□□ 2.03
SSBP4-202ENST00000348495 ATPAF2Q8N5M1 289 aa27.7■■■□□ 2.03
SSBP4-202ENST00000348495 CCNYQ8ND76 341 aa27.7■■■□□ 2.03
SSBP4-202ENST00000348495 GRK7Q8WTQ7 553 aa27.7■■■□□ 2.03
SSBP4-202ENST00000348495 CCDC114Q96M63 670 aa27.7■■■□□ 2.03
SSBP4-202ENST00000348495 ACE2Q9BYF1 805 aaPredicted RBP27.7■■■□□ 2.03
SSBP4-202ENST00000348495 FBXO10Q9UK96 956 aa27.7■■■□□ 2.03
SSBP4-202ENST00000348495 COL4A3Q01955 1670 aa27.7■■■□□ 2.02
SSBP4-202ENST00000348495 RAD51CO43502 376 aa27.7■■■□□ 2.02
SSBP4-202ENST00000348495 CACNG3O60359 315 aa27.7■■■□□ 2.02
SSBP4-202ENST00000348495 GDI1P31150 447 aa27.7■■■□□ 2.02
SSBP4-202ENST00000348495 STIP1P31948 543 aaKnown RBP27.7■■■□□ 2.02
SSBP4-202ENST00000348495 GDF10P55107 478 aa27.7■■■□□ 2.02
SSBP4-202ENST00000348495 RNF219Q5W0B1 726 aaPredicted RBP27.7■■■□□ 2.02
SSBP4-202ENST00000348495 OR7D4Q8NG98 312 aa27.7■■■□□ 2.02
SSBP4-202ENST00000348495 CCDC26Q8TAB7 109 aa27.7■■■□□ 2.02
SSBP4-202ENST00000348495 RSAD2Q8WXG1 361 aa27.7■■■□□ 2.02
SSBP4-202ENST00000348495 RTP4Q96DX8 246 aa27.7■■■□□ 2.02
SSBP4-202ENST00000348495 FEM1AQ9BSK4 669 aa27.7■■■□□ 2.02
SSBP4-202ENST00000348495 LRRC1Q9BTT6 524 aa27.7■■■□□ 2.02
SSBP4-202ENST00000348495 SLC2A11Q9BYW1 496 aa27.7■■■□□ 2.02
SSBP4-202ENST00000348495 PRDM6Q9NQX0 595 aa27.7■■■□□ 2.02
SSBP4-202ENST00000348495 IPO11Q9UI26 975 aaKnown RBP27.7■■■□□ 2.02
SSBP4-202ENST00000348495 CFAP69A5D8W1 941 aa27.69■■■□□ 2.02
SSBP4-202ENST00000348495 ECEL1O95672 775 aa27.69■■■□□ 2.02
SSBP4-202ENST00000348495 CCNCP24863 283 aa27.69■■■□□ 2.02
SSBP4-202ENST00000348495 MZF1P28698 734 aaPredicted RBP27.69■■■□□ 2.02
SSBP4-202ENST00000348495 ETFBP38117 255 aa27.69■■■□□ 2.02
SSBP4-202ENST00000348495 OXCT1P55809 520 aa27.69■■■□□ 2.02
SSBP4-202ENST00000348495 MRPS25P82663 173 aaKnown RBP27.69■■■□□ 2.02
SSBP4-202ENST00000348495 AP1B1Q10567 949 aa27.69■■■□□ 2.02
SSBP4-202ENST00000348495 LMAN2Q12907 356 aa27.69■■■□□ 2.02
SSBP4-202ENST00000348495 RUNX3Q13761 415 aa27.69■■■□□ 2.02
SSBP4-202ENST00000348495 C8orf74Q6P047 294 aa27.69■■■□□ 2.02
SSBP4-202ENST00000348495 MAATS1Q7Z4T9 603 aa27.69■■■□□ 2.02
SSBP4-202ENST00000348495 ZNF557Q8N988 423 aaPredicted RBP27.69■■■□□ 2.02
SSBP4-202ENST00000348495 HTR3CQ8WXA8 447 aa27.69■■■□□ 2.02
SSBP4-202ENST00000348495 KIAA1522Q9P206 1035 aaPredicted RBP27.69■■■□□ 2.02
SSBP4-202ENST00000348495 TTI1O43156 1089 aa27.68■■■□□ 2.02
SSBP4-202ENST00000348495 HLA-FP30511 346 aa27.68■■■□□ 2.02
SSBP4-202ENST00000348495 CSKP41240 450 aa27.68■■■□□ 2.02
SSBP4-202ENST00000348495 TUBB4BP68371 445 aa27.68■■■□□ 2.02
SSBP4-202ENST00000348495 GLE1Q53GS7 698 aaKnown RBP27.68■■■□□ 2.02
SSBP4-202ENST00000348495 ASTLQ6HA08 431 aaPredicted RBP27.68■■■□□ 2.02
SSBP4-202ENST00000348495 CCDC117Q8IWD4 279 aaPredicted RBP27.68■■■□□ 2.02
SSBP4-202ENST00000348495 ETFBKMTQ8IXQ9 262 aa27.68■■■□□ 2.02
SSBP4-202ENST00000348495 CCDC13Q8IYE1 715 aa27.68■■■□□ 2.02
SSBP4-202ENST00000348495 CPA6Q8N4T0 437 aa27.68■■■□□ 2.02
SSBP4-202ENST00000348495 FAM71DQ8N9W8 422 aa27.68■■■□□ 2.02
SSBP4-202ENST00000348495 FATE1Q969F0 183 aa27.68■■■□□ 2.02
SSBP4-202ENST00000348495 NXPE3Q969Y0 559 aa27.68■■■□□ 2.02
SSBP4-202ENST00000348495 FAM50BQ9Y247 325 aa27.68■■■□□ 2.02
SSBP4-202ENST00000348495 KCNN4O15554 427 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 ZNF189O75820 626 aaPredicted RBP27.67■■■□□ 2.02
SSBP4-202ENST00000348495 PEX11BO96011 259 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 CD70P32970 193 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 KCTD19Q17RG1 926 aaPredicted RBP27.67■■■□□ 2.02
SSBP4-202ENST00000348495 HEATR6Q6AI08 1181 aaKnown RBP27.67■■■□□ 2.02
SSBP4-202ENST00000348495 JAMLQ86YT9 394 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 MUC3BQ9H195 1237 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 KCNK12Q9HB15 430 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 LIMD1Q9UGP4 676 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 SGK1O00141 431 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 GAS8O95995 478 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 IL9P15248 144 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 PLK1P53350 603 aa27.67■■■□□ 2.02
SSBP4-202ENST00000348495 SLC12A1Q13621 1099 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms