RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PLEKHG6Q3KR16 790 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 ALFQ53S48 1182 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 FAM72AQ5TYM5 149 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 MBLAC2Q68D91 279 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 FAM72DQ6L9T8 149 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 RFX8Q6ZV50 586 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 KIAA0907Q7Z7F0 614 aaPredicted RBP12.15□□□□□ -0.46
SNCA-202ENST00000345009 FAM72BQ86X60 149 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 CHPFQ8IZ52 775 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 LZTR1Q8N653 840 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 RTL3Q8N8U3 475 aaKnown RBP12.15□□□□□ -0.46
SNCA-202ENST00000345009 DTWD2Q8NBA8 298 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 RPLP0P6Q8NHW5 317 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 USP33Q8TEY7 942 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 TTC17Q96AE7 1141 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 MYEOVQ96EZ4 313 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 PEBP4Q96S96 227 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 LRFN3Q9BTN0 628 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 CALN1Q9BXU9 219 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 MAK16Q9BXY0 300 aaKnown RBP12.15□□□□□ -0.46
SNCA-202ENST00000345009 MAGEH1Q9H213 219 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 PRDM16Q9HAZ2 1276 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 C11orf16Q9NQ32 467 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 GPATCH2LQ9NWQ4 482 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 DUSP10Q9Y6W6 482 aa12.15□□□□□ -0.46
SNCA-202ENST00000345009 WASH4PA8MWX3 477 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 PSTPIP1O43586 416 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 SYNCRIPO60506 623 aaKnown RBP12.14□□□□□ -0.47
SNCA-202ENST00000345009 RAMP2O60895 175 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 SRPRAP08240 638 aaKnown RBP12.14□□□□□ -0.47
SNCA-202ENST00000345009 TNNT1P13805 278 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 HOXC13P31276 330 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 CETN2P41208 172 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 CSKP41240 450 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 KIR2DL1P43626 348 aaPredicted RBP12.14□□□□□ -0.47
SNCA-202ENST00000345009 GEMIN4P57678 1058 aaKnown RBP12.14□□□□□ -0.47
SNCA-202ENST00000345009 YBEYP58557 167 aaPredicted RBP12.14□□□□□ -0.47
SNCA-202ENST00000345009 ECT2LQ008S8 904 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 GNA12Q03113 381 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 SLC20A2Q08357 652 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 MTAPQ13126 283 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 POLD3Q15054 466 aaPredicted RBP12.14□□□□□ -0.47
SNCA-202ENST00000345009 PARP15Q460N3 678 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 FNDC3BQ53EP0 1204 aaKnown RBP12.14□□□□□ -0.47
SNCA-202ENST00000345009 FSCBQ5H9T9 825 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 PITRM1Q5JRX3 1037 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 DAB2IPQ5VWQ8 1189 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 IL31Q6EBC2 164 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 CXorf57Q6NSI4 855 aaKnown RBP12.14□□□□□ -0.47
SNCA-202ENST00000345009 RETSATQ6NUM9 610 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 ZNF662Q6ZS27 426 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 SYT13Q7L8C5 426 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 ADIPOR2Q86V24 386 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 NLRP14Q86W24 1093 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 ZNF354CQ86Y25 554 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 C1orf210Q8IVY1 113 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 TMEM105Q8N8V8 129 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 KDM1BQ8NB78 822 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 P2RY11Q96G91 374 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 ALS2CR12Q96Q35 445 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 KCTD15Q96SI1 283 aaPredicted RBP12.14□□□□□ -0.47
SNCA-202ENST00000345009 SPON2Q9BUD6 331 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 CWC15Q9P013 229 aaKnown RBP12.14□□□□□ -0.47
SNCA-202ENST00000345009 DLGAP2Q9P1A6 1054 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 THAP10Q9P2Z0 257 aaPredicted RBP12.14□□□□□ -0.47
SNCA-202ENST00000345009 SUN2Q9UH99 717 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 DNAI1Q9UI46 699 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 SLC25A13Q9UJS0 675 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 GUCA1BQ9UMX6 200 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 TFR2Q9UP52 801 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 ATG2BQ96BY7 2078 aa12.14□□□□□ -0.47
SNCA-202ENST00000345009 CXorf51AA0A1B0GTR3 108 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 CCDC66A2RUB6 948 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 LRRD1A4D1F6 860 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 ZSCAN5CA6NGD5 496 aaPredicted RBP12.13□□□□□ -0.47
SNCA-202ENST00000345009 ALDH1A2O94788 518 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 KLF8O95600 359 aaPredicted RBP12.13□□□□□ -0.47
SNCA-202ENST00000345009 TCF4P15884 667 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 GOT1P17174 413 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 MZF1P28698 734 aaPredicted RBP12.13□□□□□ -0.47
SNCA-202ENST00000345009 SERPINB6P35237 376 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 IRAK1P51617 712 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 DGKEP52429 567 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 NDST2P52849 883 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 NRLP54845 237 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 MESP2Q0VG99 397 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 CA9Q16790 459 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 FUT11Q495W5 492 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 EMC10Q5UCC4 262 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 TMCO3Q6UWJ1 677 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 SERPINA13PQ6UXR4 307 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 CYP4V2Q6ZWL3 525 aaPredicted RBP12.13□□□□□ -0.47
SNCA-202ENST00000345009 PEX26Q7Z412 305 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 METTL3Q86U44 580 aaKnown RBP12.13□□□□□ -0.47
SNCA-202ENST00000345009 VSIG1Q86XK7 387 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 RCOR2Q8IZ40 523 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 UMODL1-AS1Q8N2C9 162 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 CCDC33Q8N5R6 958 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 ALLCQ8N6M5 410 aa12.13□□□□□ -0.47
SNCA-202ENST00000345009 UBL4BQ8N7F7 174 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms