RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 KRT37O76014 449 aa19.02■□□□□ 0.63
HOXA9-201ENST00000343483 SLC2A3P11169 496 aa19.02■□□□□ 0.63
HOXA9-201ENST00000343483 BNIP1Q12981 228 aa19.02■□□□□ 0.63
HOXA9-201ENST00000343483 PIK3R6Q5UE93 754 aa19.02■□□□□ 0.63
HOXA9-201ENST00000343483 FAM43BQ6ZT52 329 aaPredicted RBP19.02■□□□□ 0.63
HOXA9-201ENST00000343483 ARHGAP12Q8IWW6 846 aa19.02■□□□□ 0.63
HOXA9-201ENST00000343483 UNC5BQ8IZJ1 945 aa19.02■□□□□ 0.63
HOXA9-201ENST00000343483 TLR8Q9NR97 1041 aaKnown RBP19.02■□□□□ 0.63
HOXA9-201ENST00000343483 ZNF180Q9UJW8 692 aa19.02■□□□□ 0.63
HOXA9-201ENST00000343483 FAM92AA1XBS5 289 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 TRIM49D1C9J1S8 452 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 HGSO14964 777 aaPredicted RBP19.01■□□□□ 0.63
HOXA9-201ENST00000343483 PARNO95453 639 aaKnown RBP19.01■□□□□ 0.63
HOXA9-201ENST00000343483 HAPLN1P10915 354 aaPredicted RBP19.01■□□□□ 0.63
HOXA9-201ENST00000343483 PGAM1P18669 254 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 MLLT6P55198 1093 aaPredicted RBP19.01■□□□□ 0.63
HOXA9-201ENST00000343483 NCALDP61601 193 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 SMARCB1Q12824 385 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 C10orf120Q5SQS8 335 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 STEAP4Q687X5 459 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 PARP9Q8IXQ6 854 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 LZTR1Q8N653 840 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 DNAAF3Q8N9W5 541 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 GIPC2Q8TF65 315 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 ARNTL2Q8WYA1 636 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 ZNF75CPQ92670 426 aaPredicted RBP19.01■□□□□ 0.63
HOXA9-201ENST00000343483 SLC39A13Q96H72 371 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 TEKT5Q96M29 485 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 MLPHQ9BV36 600 aaPredicted RBP19.01■□□□□ 0.63
HOXA9-201ENST00000343483 SLC39A8Q9C0K1 460 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 UBP1Q9NZI7 540 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 VANGL2Q9ULK5 521 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 PDE4DIPQ5VU43 2346 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 CFAP73A6NFT4 308 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 SNRPAP09012 282 aaKnown RBP19.01■□□□□ 0.63
HOXA9-201ENST00000343483 PYGBP11216 843 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 CCNB1P14635 433 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 RGS19P49795 217 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 BMPR2Q13873 1038 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 CRYMQ14894 314 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 PSMD5Q16401 504 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 ARTNQ5T4W7 220 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 LGSNQ5TDP6 509 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 RASIP1Q5U651 963 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 SPATA17Q96L03 361 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 C12orf65Q9H3J6 166 aaKnown RBP19.01■□□□□ 0.63
HOXA9-201ENST00000343483 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.01■□□□□ 0.63
HOXA9-201ENST00000343483 CLIC5Q9NZA1 410 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 MOCS1Q9NZB8 636 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 SLC17A7Q9P2U7 560 aa19.01■□□□□ 0.63
HOXA9-201ENST00000343483 MAGED2Q9UNF1 606 aaPredicted RBP19.01■□□□□ 0.63
HOXA9-201ENST00000343483 WDR91A4D1P6 747 aa19■□□□□ 0.63
HOXA9-201ENST00000343483 ADAM12O43184 909 aa19■□□□□ 0.63
HOXA9-201ENST00000343483 LPXNO60711 386 aa19■□□□□ 0.63
HOXA9-201ENST00000343483 HMBSP08397 361 aa19■□□□□ 0.63
HOXA9-201ENST00000343483 RPL17P18621 184 aaKnown RBP19■□□□□ 0.63
HOXA9-201ENST00000343483 CCNCP24863 283 aa19■□□□□ 0.63
HOXA9-201ENST00000343483 ZNF33AQ06730 810 aa19■□□□□ 0.63
HOXA9-201ENST00000343483 SMAD1Q15797 465 aaKnown RBP19■□□□□ 0.63
HOXA9-201ENST00000343483 TBC1D1Q86TI0 1168 aaPredicted RBP19■□□□□ 0.63
HOXA9-201ENST00000343483 CCNJLQ8IV13 435 aa19■□□□□ 0.63
HOXA9-201ENST00000343483 RTL3Q8N8U3 475 aaKnown RBP19■□□□□ 0.63
HOXA9-201ENST00000343483 FBXO22Q8NEZ5 403 aa19■□□□□ 0.63
HOXA9-201ENST00000343483 ZSCAN18Q8TBC5 510 aaPredicted RBP19■□□□□ 0.63
HOXA9-201ENST00000343483 DPF3Q92784 378 aa19■□□□□ 0.63
HOXA9-201ENST00000343483 OXNAD1Q96HP4 312 aaPredicted RBP19■□□□□ 0.63
HOXA9-201ENST00000343483 C1orf74Q96LT6 269 aa19■□□□□ 0.63
HOXA9-201ENST00000343483 NAT9Q9BTE0 207 aa19■□□□□ 0.63
HOXA9-201ENST00000343483 MARCH2Q9P0N8 246 aa19■□□□□ 0.63
HOXA9-201ENST00000343483 ATP11BQ9Y2G3 1177 aa19■□□□□ 0.63
HOXA9-201ENST00000343483 MYO18AQ92614 2054 aaKnown RBP19■□□□□ 0.63
HOXA9-201ENST00000343483 ERI2A8K979 691 aaKnown RBP18.99■□□□□ 0.63
HOXA9-201ENST00000343483 C2CD2LO14523 706 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 KRT38O76015 456 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 PSEN1P49768 467 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 RPL10AP62906 217 aaKnown RBP18.99■□□□□ 0.63
HOXA9-201ENST00000343483 ELF3P78545 371 aaPredicted RBP18.99■□□□□ 0.63
HOXA9-201ENST00000343483 CCDC15Q0P6D6 951 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 IKBKEQ14164 716 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 KCTD11Q693B1 232 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 OTOP3Q7RTS5 596 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 CNTD1Q8N815 330 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 C2orf15Q8WU43 125 aaKnown RBP18.99■□□□□ 0.63
HOXA9-201ENST00000343483 APOPT1Q96IL0 206 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 TSGA13Q96PP4 275 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 APOL2Q9BQE5 337 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 OLA1Q9NTK5 396 aaKnown RBP18.99■□□□□ 0.63
HOXA9-201ENST00000343483 ALPK3Q96L96 1907 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 MAFKO60675 156 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 ALDH1A2O94788 518 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 ALADP13716 330 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 MNAT1P51948 309 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 NRG1Q02297 640 aaPredicted RBP18.99■□□□□ 0.63
HOXA9-201ENST00000343483 PRPSAP1Q14558 356 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 MS4A13Q5J8X5 152 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 CES3Q6UWW8 571 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 TFAP2DQ7Z6R9 452 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 TOX2Q96NM4 488 aa18.99■□□□□ 0.63
HOXA9-201ENST00000343483 OXCT2Q9BYC2 517 aaPredicted RBP18.99■□□□□ 0.63
HOXA9-201ENST00000343483 BFARQ9NZS9 450 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms