RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 RAD54BQ9Y620 910 aa14.05□□□□□ -0.16
TUBA1B-202ENST00000336023 PIAS3Q9Y6X2 628 aa14.05□□□□□ -0.16
TUBA1B-202ENST00000336023 ARHGAP42A6NI28 874 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 SPECC1L-ADORA2AF8WAN1 911 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 PDE2AO00408 941 aaPredicted RBP14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 PABPC1P11940 636 aaKnown RBP14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 MX2P20592 715 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 CTHP32929 405 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 ETFBP38117 255 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 EIF2DP41214 584 aaKnown RBP14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 PAFAH1B1P43034 410 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 PAPOLAP51003 745 aaKnown RBP14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 MESP2Q0VG99 397 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 GALNT2Q10471 571 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 SLC12A1Q13621 1099 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 IER5LQ5T953 404 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 GRAMD4Q6IC98 578 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 ZNF354CQ86Y25 554 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 OLFM3Q96PB7 478 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 AP1M1Q9BXS5 423 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 VPS28Q9UK41 221 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 INTS6Q9UL03 887 aaKnown RBP14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 SLC27A6Q9Y2P4 619 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 KRIT1O00522 736 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 NCAM2O15394 837 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 PLK1P53350 603 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 SERINC3Q13530 473 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 TUBB2AQ13885 445 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 PDK1Q15118 436 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 NOMO1Q15155 1222 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 GEN1Q17RS7 908 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 PLEKHG6Q3KR16 790 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 SLC44A4Q53GD3 710 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 IL31Q6EBC2 164 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 TXNDC11Q6PKC3 985 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 ARHGAP36Q6ZRI8 547 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 KIAA0907Q7Z7F0 614 aaPredicted RBP14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 RALGPS2Q86X27 583 aaPredicted RBP14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 APCDD1Q8J025 514 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 LRRN4Q8WUT4 740 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 C1orf54Q8WWF1 131 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 ATG4AQ8WYN0 398 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 PNKPQ96T60 521 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 TUBB2BQ9BVA1 445 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 ACE2Q9BYF1 805 aaPredicted RBP14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 ATP13A1Q9HD20 1204 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 CD320Q9NPF0 282 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 MRFAP1Q9Y605 127 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 DOCK4Q8N1I0 1966 aa14.04□□□□□ -0.16
TUBA1B-202ENST00000336023 MCF2LO15068 1137 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 GLULP15104 373 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 GARSP41250 739 aaKnown RBP14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 GALK1P51570 392 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 EIF3EP60228 445 aaKnown RBP14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 KDSRQ06136 332 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 DMC1Q14565 340 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 WHAMMP3Q1A5X7 153 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 FUT11Q495W5 492 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 PITRM1Q5JRX3 1037 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 TJAP1Q5JTD0 557 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 B4GALNT4Q76KP1 1039 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 ADIPOR2Q86V24 386 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 ZC3H18Q86VM9 953 aaKnown RBP14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 LRRC49Q8IUZ0 686 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 AHI1Q8N157 1196 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 PHTF2Q8N3S3 785 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 ATPAF2Q8N5M1 289 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 PRELID2Q8N945 189 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 CCNYQ8ND76 341 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 NECAB3Q96P71 396 aaPredicted RBP14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 LGMNQ99538 433 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 P2RY13Q9BPV8 354 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 FRMD8P1Q9BZ68 369 aaPredicted RBP14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 FBRSL1Q9HCM7 1045 aaKnown RBP14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 IPO11Q9UI26 975 aaKnown RBP14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 NCOR1O75376 2440 aa14.03□□□□□ -0.16
TUBA1B-202ENST00000336023 TTC28Q96AY4 2481 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 TBC1D3BA6NDS4 549 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 CBX4O00257 560 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 PPP1R12AO14974 1030 aaPredicted RBP14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 KDELR3O43731 214 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 SNAP91O60641 907 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 MAFKO60675 156 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 KAT7O95251 611 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 RBP3P10745 1247 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 GLDCP23378 1020 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 GRIA2P42262 883 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 XRCC4Q13426 336 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 CCNG2Q16589 344 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 PREPLQ4J6C6 727 aaPredicted RBP14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 TMEM215Q68D42 235 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 TERB1Q8NA31 727 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 DCAF4L2Q8NA75 395 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 SLC35B2Q8TB61 432 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 WFIKKN2Q8TEU8 576 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 HDAC11Q96DB2 347 aa14.02□□□□□ -0.16
TUBA1B-202ENST00000336023 TSGA13Q96PP4 275 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms