RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 LZTR1Q8N653 840 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 EFHBQ8N7U6 833 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 C2orf69Q8N8R5 385 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 MTMR14Q8NCE2 650 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 FAM136AQ96C01 138 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 MRPL45Q9BRJ2 306 aaKnown RBP15□□□□□ -0.01
TCOF1-201ENST00000323668 RTKNQ9BST9 563 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 SEMA6AQ9H2E6 1030 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 POMKQ9H5K3 350 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 VTA1Q9NP79 307 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 NT5MQ9NPB1 228 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 CDH22Q9UJ99 828 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 MYH7BA7E2Y1 1941 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 PAPSS1O43252 624 aaPredicted RBP15□□□□□ -0.01
TCOF1-201ENST00000323668 CSH1P0DML2 217 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 CSH2P0DML3 217 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 PTPN1P18031 435 aaKnown RBP15□□□□□ -0.01
TCOF1-201ENST00000323668 MSLNQ13421 630 aaPredicted RBP15□□□□□ -0.01
TCOF1-201ENST00000323668 MOGSQ13724 837 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 VGLL4Q14135 290 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 LIN52Q52LA3 116 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 PPM1JQ5JR12 505 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 ZNF214Q9UL59 606 aaPredicted RBP15□□□□□ -0.01
TCOF1-201ENST00000323668 SLC15A5A6NIM6 579 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 MSCO60682 206 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 CHRM3P20309 590 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 CCR1P32246 355 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 GPD2P43304 727 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 ACTR3P61158 418 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 POU4F1Q01851 419 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 SH3PXD2AQ5TCZ1 1133 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 ANO7Q6IWH7 933 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 TBL1YQ9BQ87 522 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 BEGAINQ9BUH8 593 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 WDR55Q9H6Y2 383 aaPredicted RBP15□□□□□ -0.01
TCOF1-201ENST00000323668 RNF112Q9ULX5 631 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 SLC30A1Q9Y6M5 507 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 CCDC88AQ3V6T2 1871 aa15□□□□□ -0.01
TCOF1-201ENST00000323668 CCL15-CCL14A0A0B4J2E2 113 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 VCLP18206 1134 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 NUP107P57740 925 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 CCL15Q16663 113 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 PAN2Q504Q3 1202 aaKnown RBP14.99□□□□□ -0.01
TCOF1-201ENST00000323668 UCMAQ8WVF2 138 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 KCTD4Q8WVF5 259 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 MARK4Q96L34 752 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 SLC7A8Q9UHI5 535 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 USP17L7P0C7H9 530 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 ETS2P15036 469 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 PSME3P61289 254 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 DCP1BQ8IZD4 617 aaKnown RBP14.99□□□□□ -0.01
TCOF1-201ENST00000323668 DNAJB3Q8WWF6 145 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 RPRD1AQ96P16 312 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-201ENST00000323668 HERPUD2Q9BSE4 406 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-201ENST00000323668 HOXC6P09630 235 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 FCGR1AP12314 374 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 ATP5F1P24539 256 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-201ENST00000323668 SLC25A52Q3SY17 297 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 VWA5B1Q5TIE3 1220 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 MARC1Q5VT66 337 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 B3GALNT2Q8NCR0 500 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 RDH11Q8TC12 318 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 FAXDC2Q96IV6 333 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 QKIQ96PU8 341 aaKnown RBP eCLIP14.99□□□□□ -0.01
TCOF1-201ENST00000323668 CAB39LQ9H9S4 337 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 ENTPD7Q9NQZ7 604 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 ABI2Q9NYB9 513 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-201ENST00000323668 IRS2Q9Y4H2 1338 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 C17orf102A2RUQ5 167 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 GRM5P41594 1212 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 RENBPP51606 427 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 SYTL2Q9HCH5 934 aa14.99□□□□□ -0.01
TCOF1-201ENST00000323668 RCOR3Q9P2K3 495 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-201ENST00000323668 CAPN8A6NHC0 703 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 KLF11O14901 512 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 XPAP23025 273 aaPredicted RBP14.98□□□□□ -0.01
TCOF1-201ENST00000323668 AXLP30530 894 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 HK2P52789 917 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 SLC18A2Q05940 514 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 ANGPTL8Q6UXH0 198 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 SLC26A9Q7LBE3 791 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 SLC41A1Q8IVJ1 513 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 TNIP2Q8NFZ5 429 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 OMDQ99983 421 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 DNAJC28Q9NX36 388 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 NDUFAF1Q9Y375 327 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 AP4B1Q9Y6B7 739 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 TEX264Q9Y6I9 313 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 SIPA1L3O60292 1781 aaPredicted RBP14.98□□□□□ -0.01
TCOF1-201ENST00000323668 UGT1A9O60656 530 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 GLP2RO95838 553 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 ADCYAP1R1P41586 468 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 NR1H2P55055 460 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 SLC25A11Q02978 314 aaKnown RBP14.98□□□□□ -0.01
TCOF1-201ENST00000323668 RAD51Q06609 339 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 FRG1Q14331 258 aaKnown RBP14.98□□□□□ -0.01
TCOF1-201ENST00000323668 LBX2Q6XYB7 198 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 ATP6V0D2Q8N8Y2 350 aa14.98□□□□□ -0.01
TCOF1-201ENST00000323668 DDHD1Q8NEL9 900 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms