RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CHRNGP07510 517 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 SNAPC2Q13487 334 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 TTC23Q5W5X9 447 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 TRPV3Q8NET8 790 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 NYAP2Q9P242 653 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 DLC1Q96QB1 1528 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 RPA3P35244 121 aaPredicted RBP17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 IDH2P48735 452 aaKnown RBP17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 TSC22D1Q15714 1073 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 TTI2Q6NXR4 508 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 ZNF571Q7Z3V5 609 aaPredicted RBP17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 EIF1ADQ8N9N8 165 aaKnown RBP17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 UBP1Q9NZI7 540 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 ITGA11Q9UKX5 1188 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 ENTPD4Q9Y227 616 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 ACADLP28330 430 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 ST3GAL1Q11201 340 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 NT5DC3Q86UY8 548 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 SMYD1Q8NB12 490 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 METTL6Q8TCB7 284 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 CYP3A43Q9HB55 503 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 ABLIM1O14639 778 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 LTFP02788 710 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 ZNF554Q86TJ5 538 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 BPIFB6Q8NFQ5 453 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 BHMTQ93088 406 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 TBCBQ99426 244 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 PARK7Q99497 189 aaKnown RBP17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 A0A088AWK7 358 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 HLA-DQA2P01906 255 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 ZNF10P21506 573 aaPredicted RBP17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 CBWD3Q5JTY5 395 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 CBWD5Q5RIA9 395 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 MILR1Q7Z6M3 343 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 TTC7BQ86TV6 843 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 MCOLN3Q8TDD5 553 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 LRRC4BQ9NT99 713 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 TMEM51Q9NW97 253 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 PCDHA3Q9Y5H8 950 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 ABATP80404 500 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 DNAJC14Q6Y2X3 702 aaPredicted RBP17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 HTR3CQ8WXA8 447 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 PFDN2Q9UHV9 154 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 TAF6LQ9Y6J9 622 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 MYL9P24844 172 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 S100A3P33764 101 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 RPS6KA3P51812 740 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 RBM44Q6ZP01 1051 aaKnown RBP17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 TRMT13Q9NUP7 481 aaKnown RBP17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 UMPSP11172 480 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 PIK3C3Q8NEB9 887 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 APOL2Q9BQE5 337 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 ATXN10Q9UBB4 475 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 ASTN2O75129 1339 aaPredicted RBP17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 SRRM3A6NNA2 597 aaPredicted RBP17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 AREL1O15033 823 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 HIST1H2ABP04908 130 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 HOXB8P17481 243 aaPredicted RBP17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 HIST3H2AQ7L7L0 130 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 STK40Q8N2I9 435 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 FBXW8Q8N3Y1 598 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 CHST13Q8NET6 341 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 ZNF398Q8TD17 642 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 HIST1H2ACQ93077 130 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 NFKBIZQ9BYH8 718 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 FARP2O94887 1054 aaPredicted RBP17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 SLC25A27O95847 323 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 AKR1D1P51857 326 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 ZNF540Q8NDQ6 660 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 TMEM176AQ96HP8 235 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 CISHQ9NSE2 258 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 XIAPP98170 497 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 PTGES3Q15185 160 aaKnown RBP17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 C5orf22Q49AR2 442 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 GPSM1Q86YR5 675 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 LRMDAQ9H2I8 198 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 ZMYM5Q9UJ78 669 aa17.13■□□□□ 0.33
SMCHD1-201ENST00000320876 SLC37A4O43826 429 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 ACO1P21399 889 aaKnown RBP17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 RHOAP61586 193 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 MOXD1Q6UVY6 613 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 RPTNQ6XPR3 784 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 PALB2Q86YC2 1186 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 HIPK1Q86Z02 1210 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 BORCS5Q969J3 196 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 KBTBD4Q9NVX7 518 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 DMGDHQ9UI17 866 aaKnown RBP17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 ZNF232Q9UNY5 417 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 TPP1O14773 563 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 ZNF7P17097 686 aaPredicted RBP17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 OLR1P78380 273 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 SFRP1Q8N474 314 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 MAGEB10Q96LZ2 347 aaPredicted RBP17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 GMPPBQ9Y5P6 360 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 GSAPA4D1B5 854 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 FAUP35544 74 aaKnown RBP17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 GPR1P46091 355 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 MPZL3Q6UWV2 235 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 GLT6D1Q7Z4J2 308 aa17.12■□□□□ 0.33
SMCHD1-201ENST00000320876 MAGEC3Q8TD91 643 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms