RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 TAC1P20366 129 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 PSMB4P28070 264 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 MAGEA9P43362 315 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 POLD2P49005 469 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 TUFMP49411 452 aaKnown RBP7.34□□□□□ -1.23
NPHP1-201ENST00000316534 SERPINB9P50453 376 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 BASP1P80723 227 aaKnown RBP7.34□□□□□ -1.23
NPHP1-201ENST00000316534 CCDC15Q0P6D6 951 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 DDR2Q16832 855 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 TMCO4Q5TGY1 634 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 RANBP10Q6VN20 620 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 CLEC14AQ86T13 490 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 TAX1BP1Q86VP1 789 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 MDM1Q8TC05 714 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 PEX13Q92968 403 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 IMP4Q96G21 291 aaKnown RBP7.34□□□□□ -1.23
NPHP1-201ENST00000316534 VPS11Q9H270 941 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 YY1AP1Q9H869 796 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 TREX1Q9NSU2 369 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 NDFIP2Q9NV92 336 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 SNX10Q9Y5X0 201 aa7.34□□□□□ -1.23
NPHP1-201ENST00000316534 TBKBP1A7MCY6 615 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 MYCNP04198 464 aaPredicted RBP7.34□□□□□ -1.24
NPHP1-201ENST00000316534 ATP2A2P16615 1042 aaKnown RBP7.34□□□□□ -1.24
NPHP1-201ENST00000316534 GRIA1P42261 906 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 TBX4P57082 545 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 YBEYP58557 167 aaPredicted RBP7.34□□□□□ -1.24
NPHP1-201ENST00000316534 SARNPP82979 210 aaKnown RBP7.34□□□□□ -1.24
NPHP1-201ENST00000316534 IL10RBQ08334 325 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 ILF2Q12905 390 aaKnown RBP7.34□□□□□ -1.24
NPHP1-201ENST00000316534 HNRNPDQ14103 355 aaKnown RBP7.34□□□□□ -1.24
NPHP1-201ENST00000316534 IHHQ14623 411 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 KBTBD12Q3ZCT8 623 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 PARP15Q460N3 678 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 GALNTL6Q49A17 601 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 ARHGEF18Q6ZSZ5 1173 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 ANKMY2Q8IV38 441 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 ATP6V0D2Q8N8Y2 350 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 ADAMTS19Q8TE59 1207 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 DIS3LQ8TF46 1054 aaKnown RBP7.34□□□□□ -1.24
NPHP1-201ENST00000316534 VOPP1Q96AW1 172 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 APOPT1Q96IL0 206 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 ACE2Q9BYF1 805 aaPredicted RBP7.34□□□□□ -1.24
NPHP1-201ENST00000316534 ZYG11BQ9C0D3 744 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 IL21Q9HBE4 155 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 DONSONQ9NYP3 566 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 SFMBT1Q9UHJ3 866 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 STARD13Q9Y3M8 1113 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 PLXNB3Q9ULL4 1909 aa7.34□□□□□ -1.24
NPHP1-201ENST00000316534 COL4A2P08572 1712 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 LOC285095A0A1B0GVY8 99 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 PAPSS2O95340 614 aaPredicted RBP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 CSH1P0DML2 217 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 CSH2P0DML3 217 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 BRAFP15056 766 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 EPHA5P54756 1037 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 LEKR1Q6ZMV7 388 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 C16orf59Q7L2K0 433 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 TMC8Q8IU68 726 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 MAGEC3Q8TD91 643 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 SCG3Q8WXD2 468 aaKnown RBP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 SERAC1Q96JX3 654 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 LMLNQ96KR4 655 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 FCRL3Q96P31 734 aaPredicted RBP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 RNF208Q9H0X6 261 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 TRABDQ9H4I3 376 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 ABI2Q9NYB9 513 aaPredicted RBP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 LRFN2Q9ULH4 789 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 CHMP2BQ9UQN3 213 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 TBC1D30Q9Y2I9 924 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 MRPL42Q9Y6G3 142 aaKnown RBP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 A0A1W2PPM1 405 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 C5orf67F2Z3F1 127 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 PQBP1O60828 265 aaKnown RBP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 F11P03951 625 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 KCNA4P22459 653 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 FOXN2P32314 431 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 ARCN1P48444 511 aaKnown RBP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 HTRA3P83110 453 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 MPP3Q13368 585 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 CRYMQ14894 314 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 PSMD5Q16401 504 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 INSCQ1MX18 579 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 ZFYVE27Q5T4F4 411 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 FAM91A1Q658Y4 838 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 B4GALNT4Q76KP1 1039 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 LINC00523Q86TU6 105 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 LCA5Q86VQ0 697 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 ATAD1Q8NBU5 361 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 ZNF398Q8TD17 642 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 GRAMD1AQ96CP6 724 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 STAMBPL1Q96FJ0 436 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 IL22Q9GZX6 179 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 GLOD4Q9HC38 313 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 DNAJC17Q9NVM6 304 aaKnown RBP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 ZC3H7BQ9UGR2 993 aaKnown RBP7.33□□□□□ -1.24
NPHP1-201ENST00000316534 IQANK1A0A1B0GTG1 560 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 MROH6A6NGR9 719 aa7.33□□□□□ -1.24
NPHP1-201ENST00000316534 CREB3O43889 395 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms